Protein–RNA interactions for Protein: O54879

Hmgb3, High mobility group protein B3, mousemouse

Known RBP Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb3O54879 AC122317.1-201ENSMUST00000218404 708 ntTSL 5 BASIC3.2□□□□□ -1.9
Hmgb3O54879 Gm18387-201ENSMUST00000220333 702 ntBASIC3.2□□□□□ -1.9
Hmgb3O54879 CT025552.2-201ENSMUST00000225497 317 ntBASIC3.2□□□□□ -1.9
Hmgb3O54879 AC131745.2-201ENSMUST00000225736 565 ntBASIC3.2□□□□□ -1.9
Hmgb3O54879 Gm6863-201ENSMUST00000052882 636 ntBASIC3.2□□□□□ -1.9
Hmgb3O54879 Olfr622-201ENSMUST00000058744 1105 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
Hmgb3O54879 Olfr1260-201ENSMUST00000061830 933 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
Hmgb3O54879 Olfr1369-ps1-201ENSMUST00000079050 954 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
Hmgb3O54879 mt-Nd4l-201ENSMUST00000084013 297 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
Hmgb3O54879 Olfr729-203ENSMUST00000215327 4220 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
Hmgb3O54879 Olfr729-204ENSMUST00000215451 4236 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
Hmgb3O54879 Olfr873-205ENSMUST00000215540 3784 ntAPPRIS ALT2 TSL 5 BASIC3.2□□□□□ -1.9
Hmgb3O54879 Gm38212-201ENSMUST00000194081 2756 ntBASIC3.2□□□□□ -1.9
Hmgb3O54879 Zfp992-201ENSMUST00000105733 4550 ntAPPRIS P1 TSL 3 BASIC3.2□□□□□ -1.9
Hmgb3O54879 Gm21033-201ENSMUST00000208590 2608 ntBASIC3.2□□□□□ -1.9
Hmgb3O54879 Olfr826-202ENSMUST00000203720 1535 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
Hmgb3O54879 Olfr1058-202ENSMUST00000213998 1710 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
Hmgb3O54879 Zfp708-203ENSMUST00000190566 2406 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
Hmgb3O54879 Gm24578-201ENSMUST00000103970 129 ntBASIC3.19□□□□□ -1.9
Hmgb3O54879 Gm6592-201ENSMUST00000115563 507 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
Hmgb3O54879 Klrc2-203ENSMUST00000118401 707 ntAPPRIS ALT2 TSL 1 (best) BASIC3.19□□□□□ -1.9
Hmgb3O54879 Gm6797-201ENSMUST00000119440 512 ntBASIC3.19□□□□□ -1.9
Hmgb3O54879 Gm15364-201ENSMUST00000119618 585 ntBASIC3.19□□□□□ -1.9
Hmgb3O54879 Gm11260-201ENSMUST00000121163 942 ntBASIC3.19□□□□□ -1.9
Hmgb3O54879 Olfr1001-ps1-201ENSMUST00000121340 945 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
Hmgb3O54879 Gm12103-201ENSMUST00000121892 362 ntBASIC3.19□□□□□ -1.9
Hmgb3O54879 Gm15350-201ENSMUST00000135138 569 ntTSL 2 BASIC3.19□□□□□ -1.9
Hmgb3O54879 Gm15735-201ENSMUST00000136187 514 ntTSL 3 BASIC3.19□□□□□ -1.9
Hmgb3O54879 Gm26320-201ENSMUST00000157742 306 ntBASIC3.19□□□□□ -1.9
Hmgb3O54879 Gm16243-201ENSMUST00000160351 494 ntTSL 3 BASIC3.19□□□□□ -1.9
Hmgb3O54879 Gm7335-201ENSMUST00000172475 373 ntBASIC3.19□□□□□ -1.9
Hmgb3O54879 Vmn2r-ps59-201ENSMUST00000174596 135 ntBASIC3.19□□□□□ -1.9
Hmgb3O54879 Mir5103-201ENSMUST00000175111 79 ntBASIC3.19□□□□□ -1.9
Hmgb3O54879 Gm14527-201ENSMUST00000179300 639 ntBASIC3.19□□□□□ -1.9
Hmgb3O54879 Gm4842-201ENSMUST00000183237 835 ntBASIC3.19□□□□□ -1.9
Hmgb3O54879 Gm27718-201ENSMUST00000183721 86 ntBASIC3.19□□□□□ -1.9
Hmgb3O54879 1700003C15Rik-201ENSMUST00000185360 1224 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
Hmgb3O54879 Gm9238-201ENSMUST00000196181 329 ntBASIC3.19□□□□□ -1.9
Hmgb3O54879 Gm43651-201ENSMUST00000199796 439 ntBASIC3.19□□□□□ -1.9
Hmgb3O54879 Gm43440-201ENSMUST00000201957 729 ntBASIC3.19□□□□□ -1.9
Hmgb3O54879 Gm44145-201ENSMUST00000203711 172 ntTSL 3 BASIC3.19□□□□□ -1.9
Hmgb3O54879 Gm18540-201ENSMUST00000204025 526 ntBASIC3.19□□□□□ -1.9
Hmgb3O54879 Gm44887-201ENSMUST00000208980 178 ntBASIC3.19□□□□□ -1.9
Hmgb3O54879 Olfr1133-202ENSMUST00000217368 993 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
Hmgb3O54879 Gm8264-201ENSMUST00000217801 465 ntBASIC3.19□□□□□ -1.9
Hmgb3O54879 AC153948.1-201ENSMUST00000219080 3838 ntBASIC3.19□□□□□ -1.9
Hmgb3O54879 Gm8158-201ENSMUST00000219220 465 ntBASIC3.19□□□□□ -1.9
Hmgb3O54879 Gm8112-201ENSMUST00000219637 465 ntBASIC3.19□□□□□ -1.9
Hmgb3O54879 Gm36423-204ENSMUST00000222446 541 ntTSL 2 BASIC3.19□□□□□ -1.9
Hmgb3O54879 AC114573.1-201ENSMUST00000224120 1210 ntBASIC3.19□□□□□ -1.9
Hmgb3O54879 Krtap31-2-201ENSMUST00000058761 935 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
Hmgb3O54879 Olfr469-201ENSMUST00000075704 945 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
Hmgb3O54879 Gm6462-201ENSMUST00000081488 304 ntBASIC3.19□□□□□ -1.9
Hmgb3O54879 Boll-201ENSMUST00000087585 882 ntAPPRIS P2 TSL 1 (best) BASIC3.19□□□□□ -1.9
Hmgb3O54879 Vmn1r89-202ENSMUST00000226717 4120 ntAPPRIS P2 BASIC3.19□□□□□ -1.9
Hmgb3O54879 Rtl4-201ENSMUST00000096301 1758 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
Hmgb3O54879 Vmn1r45-205ENSMUST00000227571 2757 ntBASIC3.19□□□□□ -1.9
Hmgb3O54879 Foxr2-202ENSMUST00000163801 3072 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
Hmgb3O54879 Gm36969-201ENSMUST00000194551 2809 ntBASIC3.19□□□□□ -1.9
Hmgb3O54879 Gm37668-201ENSMUST00000193745 1944 ntBASIC3.19□□□□□ -1.9
Hmgb3O54879 AC122357.2-201ENSMUST00000220732 1525 ntBASIC3.19□□□□□ -1.9
Hmgb3O54879 Cfap97-206ENSMUST00000164504 4521 ntAPPRIS P2 TSL 1 (best) BASIC3.18□□□□□ -1.9
Hmgb3O54879 Vmn2r-ps36-201ENSMUST00000172589 2562 ntBASIC3.18□□□□□ -1.9
Hmgb3O54879 Plek-202ENSMUST00000102881 4101 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
Hmgb3O54879 Gm17655-202ENSMUST00000210275 1776 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
Hmgb3O54879 Mmp12-203ENSMUST00000120655 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC3.18□□□□□ -1.9
Hmgb3O54879 Gm4736-201ENSMUST00000100870 380 ntBASIC3.18□□□□□ -1.9
Hmgb3O54879 Igkv14-100-201ENSMUST00000103325 350 ntAPPRIS ALT2 BASIC3.18□□□□□ -1.9
Hmgb3O54879 Gm13451-201ENSMUST00000117649 592 ntBASIC3.18□□□□□ -1.9
Hmgb3O54879 Gm14933-201ENSMUST00000118840 481 ntBASIC3.18□□□□□ -1.9
Hmgb3O54879 Gm13155-201ENSMUST00000119277 646 ntBASIC3.18□□□□□ -1.9
Hmgb3O54879 Gm13430-201ENSMUST00000121366 288 ntBASIC3.18□□□□□ -1.9
Hmgb3O54879 Gm8178-201ENSMUST00000121570 646 ntBASIC3.18□□□□□ -1.9
Hmgb3O54879 Gm11216-201ENSMUST00000125240 354 ntTSL 5 BASIC3.18□□□□□ -1.9
Hmgb3O54879 Rgs2-204ENSMUST00000153527 588 ntTSL 2 BASIC3.18□□□□□ -1.9
Hmgb3O54879 Gm16230-201ENSMUST00000155550 521 ntTSL 3 BASIC3.18□□□□□ -1.9
Hmgb3O54879 Gm23123-201ENSMUST00000157648 144 ntBASIC3.18□□□□□ -1.9
Hmgb3O54879 Zakit-201ENSMUST00000157677 308 ntBASIC3.18□□□□□ -1.9
Hmgb3O54879 Mir1946b-201ENSMUST00000157853 133 ntBASIC3.18□□□□□ -1.9
Hmgb3O54879 Gm24727-201ENSMUST00000158231 144 ntBASIC3.18□□□□□ -1.9
Hmgb3O54879 Gm25906-201ENSMUST00000158489 126 ntBASIC3.18□□□□□ -1.9
Hmgb3O54879 Gm15796-201ENSMUST00000162135 204 ntBASIC3.18□□□□□ -1.9
Hmgb3O54879 Gm7497-201ENSMUST00000183064 1003 ntBASIC3.18□□□□□ -1.9
Hmgb3O54879 V1rg10-201ENSMUST00000183378 937 ntBASIC3.18□□□□□ -1.9
Hmgb3O54879 Gm28396-201ENSMUST00000190309 379 ntBASIC3.18□□□□□ -1.9
Hmgb3O54879 Gm29038-201ENSMUST00000191543 678 ntBASIC3.18□□□□□ -1.9
Hmgb3O54879 Kcnmb2-206ENSMUST00000194796 338 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
Hmgb3O54879 Gm17887-201ENSMUST00000200194 547 ntBASIC3.18□□□□□ -1.9
Hmgb3O54879 Gm10445-201ENSMUST00000203521 762 ntTSL 2 BASIC3.18□□□□□ -1.9
Hmgb3O54879 Clec2f-202ENSMUST00000204981 657 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
Hmgb3O54879 AC153816.1-201ENSMUST00000217870 764 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
Hmgb3O54879 Gm16381-201ENSMUST00000220528 503 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
Hmgb3O54879 Gm2001-201ENSMUST00000223236 503 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
Hmgb3O54879 Spata19-201ENSMUST00000034473 697 ntAPPRIS P2 TSL 1 (best) BASIC3.18□□□□□ -1.9
Hmgb3O54879 Olfr453-201ENSMUST00000053647 954 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
Hmgb3O54879 Olfr123-201ENSMUST00000054748 930 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
Hmgb3O54879 Gm25581-201ENSMUST00000083410 164 ntBASIC3.18□□□□□ -1.9
Hmgb3O54879 Olfr1154-201ENSMUST00000099844 933 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
Hmgb3O54879 Olfr1111-201ENSMUST00000099860 940 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
Hmgb3O54879 Zfp131-201ENSMUST00000177916 3067 ntAPPRIS ALT2 TSL 1 (best) BASIC3.18□□□□□ -1.9
Retrieved 100 of 76,532 protein–RNA pairs in 82.9 ms