Protein–RNA interactions for Protein: O54689

Ccr6, C-C chemokine receptor type 6, mousemouse

Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccr6O54689 Gm15643-201ENSMUST00000126556 383 ntTSL 3 BASIC3.31□□□□□ -1.88
Ccr6O54689 Gm5353-201ENSMUST00000139800 793 ntBASIC3.31□□□□□ -1.88
Ccr6O54689 Sox5it-201ENSMUST00000144026 1207 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
Ccr6O54689 Gm22226-201ENSMUST00000157355 109 ntBASIC3.31□□□□□ -1.88
Ccr6O54689 Gm23905-201ENSMUST00000157568 109 ntBASIC3.31□□□□□ -1.88
Ccr6O54689 Gm25383-201ENSMUST00000157810 144 ntBASIC3.31□□□□□ -1.88
Ccr6O54689 Gm25433-201ENSMUST00000158283 286 ntBASIC3.31□□□□□ -1.88
Ccr6O54689 Gm23198-201ENSMUST00000158811 91 ntBASIC3.31□□□□□ -1.88
Ccr6O54689 Gm38393-201ENSMUST00000179360 1199 ntAPPRIS P5 TSL 5 BASIC3.31□□□□□ -1.88
Ccr6O54689 Gm15099-201ENSMUST00000179833 573 ntTSL 5 BASIC3.31□□□□□ -1.88
Ccr6O54689 Gm27543-201ENSMUST00000183562 177 ntBASIC3.31□□□□□ -1.88
Ccr6O54689 1700003C15Rik-202ENSMUST00000188236 710 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
Ccr6O54689 Gm29454-201ENSMUST00000190805 393 ntBASIC3.31□□□□□ -1.88
Ccr6O54689 Ighv1-27-201ENSMUST00000194473 340 ntBASIC3.31□□□□□ -1.88
Ccr6O54689 Gm43601-201ENSMUST00000196294 945 ntBASIC3.31□□□□□ -1.88
Ccr6O54689 Gm43855-201ENSMUST00000197462 507 ntBASIC3.31□□□□□ -1.88
Ccr6O54689 Gm42526-201ENSMUST00000198956 393 ntBASIC3.31□□□□□ -1.88
Ccr6O54689 Gm43945-201ENSMUST00000203595 754 ntBASIC3.31□□□□□ -1.88
Ccr6O54689 Gm44761-201ENSMUST00000209080 440 ntTSL 2 BASIC3.31□□□□□ -1.88
Ccr6O54689 Gm45458-201ENSMUST00000209900 522 ntBASIC3.31□□□□□ -1.88
Ccr6O54689 Gm7128-201ENSMUST00000211639 533 ntBASIC3.31□□□□□ -1.88
Ccr6O54689 AC158686.2-201ENSMUST00000218599 976 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
Ccr6O54689 CT030170.6-201ENSMUST00000221149 550 ntTSL 5 BASIC3.31□□□□□ -1.88
Ccr6O54689 AC127270.2-201ENSMUST00000221337 247 ntBASIC3.31□□□□□ -1.88
Ccr6O54689 Smim15-204ENSMUST00000224390 645 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
Ccr6O54689 AC168881.1-201ENSMUST00000226018 430 ntBASIC3.31□□□□□ -1.88
Ccr6O54689 AL607142.1-201ENSMUST00000226560 78 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
Ccr6O54689 Vmn1r237-201ENSMUST00000077301 950 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
Ccr6O54689 Vmn1r52-201ENSMUST00000079832 930 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
Ccr6O54689 Cdc27-203ENSMUST00000106962 3160 ntTSL 5 BASIC3.31□□□□□ -1.88
Ccr6O54689 Olfr873-205ENSMUST00000215540 3784 ntAPPRIS ALT2 TSL 5 BASIC3.31□□□□□ -1.88
Ccr6O54689 Btbd35f12-201ENSMUST00000178827 1908 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
Ccr6O54689 Olfr548-ps1-202ENSMUST00000210064 4287 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
Ccr6O54689 F8-201ENSMUST00000033539 9784 ntAPPRIS P3 TSL 1 (best) BASIC3.3□□□□□ -1.88
Ccr6O54689 Olfr1309-203ENSMUST00000214935 5448 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
Ccr6O54689 Olfr131-202ENSMUST00000172933 1358 ntAPPRIS P1 TSL 3 BASIC3.3□□□□□ -1.88
Ccr6O54689 Gm10256-201ENSMUST00000179404 1358 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
Ccr6O54689 Csmd3-209ENSMUST00000162830 13012 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
Ccr6O54689 Olfr1270-206ENSMUST00000217139 4803 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
Ccr6O54689 AC147615.2-201ENSMUST00000219876 2154 ntBASIC3.3□□□□□ -1.88
Ccr6O54689 Ighv3-5-201ENSMUST00000103479 299 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
Ccr6O54689 Gm13650-201ENSMUST00000117729 433 ntBASIC3.3□□□□□ -1.88
Ccr6O54689 Arl6-203ENSMUST00000118438 875 ntTSL 3 BASIC3.3□□□□□ -1.88
Ccr6O54689 Gm13314-201ENSMUST00000118742 335 ntBASIC3.3□□□□□ -1.88
Ccr6O54689 Gm15206-201ENSMUST00000119143 454 ntBASIC3.3□□□□□ -1.88
Ccr6O54689 Gm12757-201ENSMUST00000119465 800 ntBASIC3.3□□□□□ -1.88
Ccr6O54689 Gm11746-201ENSMUST00000119843 821 ntBASIC3.3□□□□□ -1.88
Ccr6O54689 Gm14559-201ENSMUST00000121745 496 ntBASIC3.3□□□□□ -1.88
Ccr6O54689 Nr6a1os-201ENSMUST00000129089 645 ntTSL 2 BASIC3.3□□□□□ -1.88
Ccr6O54689 4930451E10Rik-201ENSMUST00000130840 409 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
Ccr6O54689 Gm16347-201ENSMUST00000131707 622 ntTSL 2 BASIC3.3□□□□□ -1.88
Ccr6O54689 Gm23123-201ENSMUST00000157648 144 ntBASIC3.3□□□□□ -1.88
Ccr6O54689 Gm24727-201ENSMUST00000158231 144 ntBASIC3.3□□□□□ -1.88
Ccr6O54689 Gm22519-201ENSMUST00000158270 178 ntBASIC3.3□□□□□ -1.88
Ccr6O54689 Gm5263-201ENSMUST00000163646 601 ntBASIC3.3□□□□□ -1.88
Ccr6O54689 Ctla2b-202ENSMUST00000171347 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.3□□□□□ -1.88
Ccr6O54689 Gm27044-201ENSMUST00000183033 796 ntBASIC3.3□□□□□ -1.88
Ccr6O54689 Rhoay-ps3-201ENSMUST00000187648 576 ntBASIC3.3□□□□□ -1.88
Ccr6O54689 Gm28701-201ENSMUST00000189778 1010 ntTSL 5 BASIC3.3□□□□□ -1.88
Ccr6O54689 Gm38330-201ENSMUST00000192743 959 ntBASIC3.3□□□□□ -1.88
Ccr6O54689 Gm4248-201ENSMUST00000196905 316 ntBASIC3.3□□□□□ -1.88
Ccr6O54689 Csn2-208ENSMUST00000198057 827 ntAPPRIS ALT2 TSL 5 BASIC3.3□□□□□ -1.88
Ccr6O54689 Gm2926-201ENSMUST00000205625 239 ntBASIC3.3□□□□□ -1.88
Ccr6O54689 Gm20074-201ENSMUST00000208144 484 ntBASIC3.3□□□□□ -1.88
Ccr6O54689 Gm34983-201ENSMUST00000219484 396 ntTSL 3 BASIC3.3□□□□□ -1.88
Ccr6O54689 Gm4052-201ENSMUST00000220890 451 ntBASIC3.3□□□□□ -1.88
Ccr6O54689 Gm19134-201ENSMUST00000221203 487 ntBASIC3.3□□□□□ -1.88
Ccr6O54689 Gm18921-201ENSMUST00000221798 366 ntBASIC3.3□□□□□ -1.88
Ccr6O54689 AC102435.1-201ENSMUST00000222199 908 ntTSL 5 BASIC3.3□□□□□ -1.88
Ccr6O54689 Gm5457-201ENSMUST00000022260 333 ntBASIC3.3□□□□□ -1.88
Ccr6O54689 AC156803.1-201ENSMUST00000224407 820 ntBASIC3.3□□□□□ -1.88
Ccr6O54689 CT030194.1-201ENSMUST00000225507 532 ntBASIC3.3□□□□□ -1.88
Ccr6O54689 AC154738.5-201ENSMUST00000227397 310 ntBASIC3.3□□□□□ -1.88
Ccr6O54689 9230110F15Rik-201ENSMUST00000054175 1135 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
Ccr6O54689 BC023105-201ENSMUST00000073997 1227 ntBASIC3.3□□□□□ -1.88
Ccr6O54689 Klk1b7-ps-201ENSMUST00000078897 448 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
Ccr6O54689 Zfp850-201ENSMUST00000099111 941 ntBASIC3.3□□□□□ -1.88
Ccr6O54689 Muc15-202ENSMUST00000111016 3421 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
Ccr6O54689 Gm14062-201ENSMUST00000134795 4134 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
Ccr6O54689 Npy6r-201ENSMUST00000042747 2567 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
Ccr6O54689 Cd86-201ENSMUST00000089620 2539 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
Ccr6O54689 Pramel6-202ENSMUST00000111572 1781 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
Ccr6O54689 Olfr665-202ENSMUST00000215761 2522 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
Ccr6O54689 Ndst4-204ENSMUST00000173932 7417 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
Ccr6O54689 Gm37668-201ENSMUST00000193745 1944 ntBASIC3.29□□□□□ -1.88
Ccr6O54689 Ankrd28-207ENSMUST00000227863 6616 ntAPPRIS ALT1 BASIC3.29□□□□□ -1.88
Ccr6O54689 Olfr1146-ps1-201ENSMUST00000117180 943 ntBASIC3.29□□□□□ -1.88
Ccr6O54689 Gm14365-201ENSMUST00000117535 587 ntBASIC3.29□□□□□ -1.88
Ccr6O54689 Gm13890-201ENSMUST00000117578 390 ntBASIC3.29□□□□□ -1.88
Ccr6O54689 Gm12112-201ENSMUST00000117772 231 ntBASIC3.29□□□□□ -1.88
Ccr6O54689 Gm1866-201ENSMUST00000120701 477 ntBASIC3.29□□□□□ -1.88
Ccr6O54689 Gm13220-201ENSMUST00000121535 508 ntBASIC3.29□□□□□ -1.88
Ccr6O54689 Gm14977-201ENSMUST00000121626 812 ntBASIC3.29□□□□□ -1.88
Ccr6O54689 Olfr405-ps1-202ENSMUST00000127098 711 ntTSL 3 BASIC3.29□□□□□ -1.88
Ccr6O54689 Gm11376-201ENSMUST00000144541 231 ntTSL 5 BASIC3.29□□□□□ -1.88
Ccr6O54689 A930041C12Rik-201ENSMUST00000149156 537 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
Ccr6O54689 Gm23116-201ENSMUST00000158481 67 ntBASIC3.29□□□□□ -1.88
Ccr6O54689 Gm6486-201ENSMUST00000166202 434 ntBASIC3.29□□□□□ -1.88
Ccr6O54689 Gm3646-201ENSMUST00000171319 352 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
Ccr6O54689 Gm4214-201ENSMUST00000174451 960 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
Retrieved 100 of 76,532 protein–RNA pairs in 86.7 ms