Protein–RNA interactions for Protein: A2AX52

Col6a4, Collagen alpha-4(VI) chain, mousemouse

Predictions only

Length 2,309 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a4A2AX52 AC165366.1-201ENSMUST00000225905 505 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
Col6a4A2AX52 Gm10145-201ENSMUST00000077776 462 ntBASIC3.24□□□□□ -1.89
Col6a4A2AX52 Defb33-201ENSMUST00000098908 424 ntAPPRIS P1 TSL 2 BASIC3.24□□□□□ -1.89
Col6a4A2AX52 Gm32647-201ENSMUST00000206116 3288 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
Col6a4A2AX52 Gm37393-201ENSMUST00000195118 3870 ntBASIC3.24□□□□□ -1.89
Col6a4A2AX52 Olfr970-202ENSMUST00000213975 1630 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
Col6a4A2AX52 Olfr1138-202ENSMUST00000214573 1611 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
Col6a4A2AX52 Gpr141-201ENSMUST00000065335 3433 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
Col6a4A2AX52 Fgf7-202ENSMUST00000110442 2287 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
Col6a4A2AX52 Ogt-201ENSMUST00000044475 5384 ntAPPRIS P3 TSL 1 (best) BASIC3.24□□□□□ -1.89
Col6a4A2AX52 Gm35755-201ENSMUST00000222392 2077 ntBASIC3.24□□□□□ -1.89
Col6a4A2AX52 Gm8473-201ENSMUST00000176697 1885 ntBASIC3.24□□□□□ -1.89
Col6a4A2AX52 Gm42614-201ENSMUST00000198724 1554 ntBASIC3.24□□□□□ -1.89
Col6a4A2AX52 AC134596.1-201ENSMUST00000222016 1922 ntBASIC3.24□□□□□ -1.89
Col6a4A2AX52 Gm14981-201ENSMUST00000117325 943 ntBASIC3.24□□□□□ -1.89
Col6a4A2AX52 Gm14240-201ENSMUST00000120353 546 ntBASIC3.24□□□□□ -1.89
Col6a4A2AX52 1700019E08Rik-202ENSMUST00000153567 635 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
Col6a4A2AX52 Gm16064-201ENSMUST00000154997 464 ntTSL 2 BASIC3.24□□□□□ -1.89
Col6a4A2AX52 Gm22135-201ENSMUST00000158752 108 ntBASIC3.24□□□□□ -1.89
Col6a4A2AX52 Obox1-203ENSMUST00000172881 821 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
Col6a4A2AX52 Gm29380-201ENSMUST00000185898 416 ntTSL 5 BASIC3.24□□□□□ -1.89
Col6a4A2AX52 Gm28830-201ENSMUST00000188192 213 ntBASIC3.24□□□□□ -1.89
Col6a4A2AX52 Gm18944-201ENSMUST00000207672 643 ntBASIC3.24□□□□□ -1.89
Col6a4A2AX52 Gm45162-201ENSMUST00000209013 618 ntBASIC3.24□□□□□ -1.89
Col6a4A2AX52 Gm4928-201ENSMUST00000219622 850 ntBASIC3.24□□□□□ -1.89
Col6a4A2AX52 AC159629.1-201ENSMUST00000220698 568 ntTSL 2 BASIC3.24□□□□□ -1.89
Col6a4A2AX52 AC159885.1-201ENSMUST00000222221 199 ntBASIC3.24□□□□□ -1.89
Col6a4A2AX52 AC133283.1-201ENSMUST00000228443 859 ntBASIC3.24□□□□□ -1.89
Col6a4A2AX52 Olfr875-202ENSMUST00000215128 2039 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
Col6a4A2AX52 Olfr828-202ENSMUST00000215380 1689 ntAPPRIS P1 TSL 3 BASIC3.24□□□□□ -1.89
Col6a4A2AX52 Vwc2l-203ENSMUST00000161937 4323 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
Col6a4A2AX52 Nebl-206ENSMUST00000131957 1709 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
Col6a4A2AX52 Macc1-204ENSMUST00000222058 4193 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
Col6a4A2AX52 Txndc9-204ENSMUST00000193832 3472 ntTSL 2 BASIC3.23□□□□□ -1.89
Col6a4A2AX52 Gm37930-201ENSMUST00000194308 1886 ntBASIC3.23□□□□□ -1.89
Col6a4A2AX52 Olfr388-ps1-201ENSMUST00000118336 2129 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
Col6a4A2AX52 Olfr1402-202ENSMUST00000199297 4051 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
Col6a4A2AX52 Gm42481-201ENSMUST00000196822 2178 ntBASIC3.23□□□□□ -1.89
Col6a4A2AX52 Spef2-206ENSMUST00000208854 7038 ntAPPRIS ALT2 TSL 5 BASIC3.23□□□□□ -1.89
Col6a4A2AX52 Trav7n-4-201ENSMUST00000103609 341 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
Col6a4A2AX52 Gm22023-201ENSMUST00000104354 130 ntBASIC3.23□□□□□ -1.89
Col6a4A2AX52 Gm12982-201ENSMUST00000117408 190 ntBASIC3.23□□□□□ -1.89
Col6a4A2AX52 Gm12268-201ENSMUST00000118398 442 ntBASIC3.23□□□□□ -1.89
Col6a4A2AX52 Gm13677-201ENSMUST00000120739 595 ntBASIC3.23□□□□□ -1.89
Col6a4A2AX52 Gm15986-201ENSMUST00000122153 400 ntBASIC3.23□□□□□ -1.89
Col6a4A2AX52 Olfr325-201ENSMUST00000169428 1065 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
Col6a4A2AX52 D830030K20Rik-202ENSMUST00000178670 441 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
Col6a4A2AX52 Gm27457-201ENSMUST00000184771 156 ntBASIC3.23□□□□□ -1.89
Col6a4A2AX52 Gm35876-201ENSMUST00000205044 459 ntBASIC3.23□□□□□ -1.89
Col6a4A2AX52 Gm36633-201ENSMUST00000205873 647 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
Col6a4A2AX52 Gm31897-201ENSMUST00000205924 340 ntTSL 5 BASIC3.23□□□□□ -1.89
Col6a4A2AX52 AC117949.2-201ENSMUST00000225900 584 ntBASIC3.23□□□□□ -1.89
Col6a4A2AX52 Olfr1442-201ENSMUST00000057924 1065 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
Col6a4A2AX52 P2ry10-201ENSMUST00000053375 2888 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
Col6a4A2AX52 Chrdl1-201ENSMUST00000063029 3550 ntAPPRIS ALT2 TSL 1 (best) BASIC3.23□□□□□ -1.89
Col6a4A2AX52 Olfr1280-203ENSMUST00000219291 6883 ntAPPRIS P1 TSL 3 BASIC3.23□□□□□ -1.89
Col6a4A2AX52 Lrif1-201ENSMUST00000098750 3103 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
Col6a4A2AX52 Il22ra2-201ENSMUST00000036564 2498 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
Col6a4A2AX52 Vmn2r3-201ENSMUST00000170244 2670 ntAPPRIS P2 TSL 5 BASIC3.23□□□□□ -1.89
Col6a4A2AX52 n-R5s219-201ENSMUST00000104328 132 ntBASIC3.22□□□□□ -1.89
Col6a4A2AX52 Gm11971-201ENSMUST00000117715 288 ntBASIC3.22□□□□□ -1.89
Col6a4A2AX52 Ccnb2-ps-201ENSMUST00000118290 623 ntBASIC3.22□□□□□ -1.89
Col6a4A2AX52 Gm12412-201ENSMUST00000121867 328 ntBASIC3.22□□□□□ -1.89
Col6a4A2AX52 Gm3486-201ENSMUST00000169361 883 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
Col6a4A2AX52 Gm27308-201ENSMUST00000184807 233 ntBASIC3.22□□□□□ -1.89
Col6a4A2AX52 Gm44611-201ENSMUST00000207507 355 ntBASIC3.22□□□□□ -1.89
Col6a4A2AX52 CT030657.1-201ENSMUST00000222397 378 ntTSL 5 BASIC3.22□□□□□ -1.89
Col6a4A2AX52 CT030662.2-201ENSMUST00000226942 805 ntBASIC3.22□□□□□ -1.89
Col6a4A2AX52 Defb19-201ENSMUST00000053180 394 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
Col6a4A2AX52 Olfr206-201ENSMUST00000084791 1005 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
Col6a4A2AX52 Wwp1-201ENSMUST00000035982 4832 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
Col6a4A2AX52 Olfr1487-205ENSMUST00000217061 4080 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
Col6a4A2AX52 Nlrp4f-201ENSMUST00000037372 3527 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
Col6a4A2AX52 Matr3-ps2-201ENSMUST00000160839 1996 ntBASIC3.22□□□□□ -1.89
Col6a4A2AX52 Olfr361-202ENSMUST00000214969 2749 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
Col6a4A2AX52 Olfr1097-201ENSMUST00000111576 4705 ntAPPRIS P1 TSL 3 BASIC3.22□□□□□ -1.89
Col6a4A2AX52 AC108802.1-201ENSMUST00000219501 3142 ntBASIC3.22□□□□□ -1.89
Col6a4A2AX52 Abcg2-201ENSMUST00000031822 5717 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
Col6a4A2AX52 Zfp850-203ENSMUST00000180502 6163 ntAPPRIS P1 TSL 3 BASIC3.22□□□□□ -1.89
Col6a4A2AX52 Gm22958-201ENSMUST00000122512 184 ntBASIC3.22□□□□□ -1.89
Col6a4A2AX52 Gm13335-201ENSMUST00000129994 471 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
Col6a4A2AX52 Gm8289-201ENSMUST00000144814 1182 ntBASIC3.22□□□□□ -1.89
Col6a4A2AX52 4930503B20Rik-203ENSMUST00000149825 970 ntAPPRIS ALT2 TSL 1 (best) BASIC3.22□□□□□ -1.89
Col6a4A2AX52 Gm23326-201ENSMUST00000157419 105 ntBASIC3.22□□□□□ -1.89
Col6a4A2AX52 Gm23121-201ENSMUST00000157653 173 ntBASIC3.22□□□□□ -1.89
Col6a4A2AX52 Gm22398-201ENSMUST00000174941 125 ntBASIC3.22□□□□□ -1.89
Col6a4A2AX52 Gm25731-201ENSMUST00000175167 125 ntBASIC3.22□□□□□ -1.89
Col6a4A2AX52 9430092D12Rik-201ENSMUST00000194937 1274 ntBASIC3.22□□□□□ -1.89
Col6a4A2AX52 AC152415.1-201ENSMUST00000213320 440 ntBASIC3.22□□□□□ -1.89
Col6a4A2AX52 AC118733.1-201ENSMUST00000217387 1217 ntBASIC3.22□□□□□ -1.89
Col6a4A2AX52 AC160931.2-201ENSMUST00000221445 351 ntBASIC3.22□□□□□ -1.89
Col6a4A2AX52 Gm24533-201ENSMUST00000083138 196 ntBASIC3.22□□□□□ -1.89
Col6a4A2AX52 Gm16421-201ENSMUST00000117616 1557 ntBASIC3.22□□□□□ -1.89
Col6a4A2AX52 Olfr995-202ENSMUST00000216933 1706 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
Col6a4A2AX52 Vmn1r197-203ENSMUST00000227017 5158 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
Col6a4A2AX52 Gm5447-201ENSMUST00000070258 1773 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
Col6a4A2AX52 Gm37588-201ENSMUST00000195024 2496 ntBASIC3.22□□□□□ -1.89
Col6a4A2AX52 Olfr1277-202ENSMUST00000214760 5944 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
Col6a4A2AX52 Gm20775-201ENSMUST00000100115 1851 ntBASIC3.21□□□□□ -1.89
Col6a4A2AX52 Vmn1r72-202ENSMUST00000209638 6501 ntAPPRIS P1 TSL 3 BASIC3.21□□□□□ -1.89
Retrieved 100 of 76,532 protein–RNA pairs in 73.2 ms