Protein–RNA interactions for Protein: Q9Z2Q5

Mrpl40, 39S ribosomal protein L40, mitochondrial, mousemouse

Predictions only

Length 206 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mrpl40Q9Z2Q5 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Mrpl40Q9Z2Q5 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
Mrpl40Q9Z2Q5 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC17.46■□□□□ 0.39
Mrpl40Q9Z2Q5 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Mrpl40Q9Z2Q5 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Mrpl40Q9Z2Q5 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Mrpl40Q9Z2Q5 Gm9484-201ENSMUST00000195892 1159 ntBASIC17.46■□□□□ 0.39
Mrpl40Q9Z2Q5 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Mrpl40Q9Z2Q5 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Mrpl40Q9Z2Q5 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC17.46■□□□□ 0.39
Mrpl40Q9Z2Q5 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Mrpl40Q9Z2Q5 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Mrpl40Q9Z2Q5 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Mrpl40Q9Z2Q5 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
Mrpl40Q9Z2Q5 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.38
Mrpl40Q9Z2Q5 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Mrpl40Q9Z2Q5 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Mrpl40Q9Z2Q5 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Mrpl40Q9Z2Q5 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Mrpl40Q9Z2Q5 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Mrpl40Q9Z2Q5 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Mrpl40Q9Z2Q5 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Mrpl40Q9Z2Q5 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Mrpl40Q9Z2Q5 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
Mrpl40Q9Z2Q5 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Mrpl40Q9Z2Q5 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC17.45■□□□□ 0.38
Mrpl40Q9Z2Q5 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC17.45■□□□□ 0.38
Mrpl40Q9Z2Q5 Gm7977-201ENSMUST00000193787 748 ntBASIC17.45■□□□□ 0.38
Mrpl40Q9Z2Q5 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC17.45■□□□□ 0.38
Mrpl40Q9Z2Q5 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
Mrpl40Q9Z2Q5 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Mrpl40Q9Z2Q5 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Mrpl40Q9Z2Q5 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Mrpl40Q9Z2Q5 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC17.45■□□□□ 0.38
Mrpl40Q9Z2Q5 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Mrpl40Q9Z2Q5 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Mrpl40Q9Z2Q5 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Mrpl40Q9Z2Q5 Gm7856-201ENSMUST00000117514 1493 ntBASIC17.44■□□□□ 0.38
Mrpl40Q9Z2Q5 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Mrpl40Q9Z2Q5 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Mrpl40Q9Z2Q5 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Mrpl40Q9Z2Q5 Gm15635-204ENSMUST00000208024 2539 ntBASIC17.44■□□□□ 0.38
Mrpl40Q9Z2Q5 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Mrpl40Q9Z2Q5 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
Mrpl40Q9Z2Q5 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Mrpl40Q9Z2Q5 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Mrpl40Q9Z2Q5 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Mrpl40Q9Z2Q5 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Mrpl40Q9Z2Q5 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC17.44■□□□□ 0.38
Mrpl40Q9Z2Q5 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Mrpl40Q9Z2Q5 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Mrpl40Q9Z2Q5 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Mrpl40Q9Z2Q5 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Mrpl40Q9Z2Q5 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC17.44■□□□□ 0.38
Mrpl40Q9Z2Q5 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC17.44■□□□□ 0.38
Mrpl40Q9Z2Q5 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Mrpl40Q9Z2Q5 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Mrpl40Q9Z2Q5 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Mrpl40Q9Z2Q5 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Mrpl40Q9Z2Q5 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Mrpl40Q9Z2Q5 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Mrpl40Q9Z2Q5 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Mrpl40Q9Z2Q5 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Mrpl40Q9Z2Q5 Gm20472-201ENSMUST00000174403 1240 ntBASIC17.43■□□□□ 0.38
Mrpl40Q9Z2Q5 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
Mrpl40Q9Z2Q5 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Mrpl40Q9Z2Q5 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC17.43■□□□□ 0.38
Mrpl40Q9Z2Q5 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC17.43■□□□□ 0.38
Mrpl40Q9Z2Q5 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Mrpl40Q9Z2Q5 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Mrpl40Q9Z2Q5 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Mrpl40Q9Z2Q5 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Mrpl40Q9Z2Q5 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Mrpl40Q9Z2Q5 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Mrpl40Q9Z2Q5 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Mrpl40Q9Z2Q5 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Mrpl40Q9Z2Q5 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Mrpl40Q9Z2Q5 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Mrpl40Q9Z2Q5 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Mrpl40Q9Z2Q5 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Mrpl40Q9Z2Q5 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Mrpl40Q9Z2Q5 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Mrpl40Q9Z2Q5 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Mrpl40Q9Z2Q5 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Mrpl40Q9Z2Q5 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Mrpl40Q9Z2Q5 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Mrpl40Q9Z2Q5 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Mrpl40Q9Z2Q5 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Mrpl40Q9Z2Q5 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC17.42■□□□□ 0.38
Mrpl40Q9Z2Q5 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Mrpl40Q9Z2Q5 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Mrpl40Q9Z2Q5 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Mrpl40Q9Z2Q5 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Mrpl40Q9Z2Q5 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Mrpl40Q9Z2Q5 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Mrpl40Q9Z2Q5 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Mrpl40Q9Z2Q5 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC17.41■□□□□ 0.38
Mrpl40Q9Z2Q5 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC17.41■□□□□ 0.38
Mrpl40Q9Z2Q5 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC17.41■□□□□ 0.38
Mrpl40Q9Z2Q5 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 24.2 ms