Protein–RNA interactions for Protein: Q9WTU3

Scn8a, Sodium channel protein type 8 subunit alpha, mousemouse

Predictions only

Length 1,978 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8aQ9WTU3 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
Scn8aQ9WTU3 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Scn8aQ9WTU3 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC17.62■□□□□ 0.41
Scn8aQ9WTU3 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Scn8aQ9WTU3 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Scn8aQ9WTU3 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC17.62■□□□□ 0.41
Scn8aQ9WTU3 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Scn8aQ9WTU3 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Scn8aQ9WTU3 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Scn8aQ9WTU3 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
Scn8aQ9WTU3 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Scn8aQ9WTU3 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC17.61■□□□□ 0.41
Scn8aQ9WTU3 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC17.61■□□□□ 0.41
Scn8aQ9WTU3 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Scn8aQ9WTU3 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Scn8aQ9WTU3 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Scn8aQ9WTU3 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Scn8aQ9WTU3 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Scn8aQ9WTU3 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Scn8aQ9WTU3 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC17.6■□□□□ 0.41
Scn8aQ9WTU3 AC120002.2-201ENSMUST00000220205 773 ntBASIC17.6■□□□□ 0.41
Scn8aQ9WTU3 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Scn8aQ9WTU3 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Scn8aQ9WTU3 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Scn8aQ9WTU3 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Scn8aQ9WTU3 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Scn8aQ9WTU3 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Scn8aQ9WTU3 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Scn8aQ9WTU3 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
Scn8aQ9WTU3 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Scn8aQ9WTU3 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Scn8aQ9WTU3 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC17.6■□□□□ 0.41
Scn8aQ9WTU3 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC17.6■□□□□ 0.41
Scn8aQ9WTU3 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Scn8aQ9WTU3 Gm6659-201ENSMUST00000174752 547 ntBASIC17.6■□□□□ 0.41
Scn8aQ9WTU3 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Scn8aQ9WTU3 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC17.6■□□□□ 0.41
Scn8aQ9WTU3 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC17.6■□□□□ 0.41
Scn8aQ9WTU3 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Scn8aQ9WTU3 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Scn8aQ9WTU3 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Scn8aQ9WTU3 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Scn8aQ9WTU3 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Scn8aQ9WTU3 Gm2274-201ENSMUST00000184539 609 ntBASIC17.59■□□□□ 0.41
Scn8aQ9WTU3 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC17.59■□□□□ 0.41
Scn8aQ9WTU3 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Scn8aQ9WTU3 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Scn8aQ9WTU3 Gm10013-201ENSMUST00000106074 672 ntBASIC17.59■□□□□ 0.41
Scn8aQ9WTU3 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC17.59■□□□□ 0.41
Scn8aQ9WTU3 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Scn8aQ9WTU3 Gm7977-201ENSMUST00000193787 748 ntBASIC17.59■□□□□ 0.41
Scn8aQ9WTU3 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC17.58■□□□□ 0.41
Scn8aQ9WTU3 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Scn8aQ9WTU3 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Scn8aQ9WTU3 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC17.58■□□□□ 0.41
Scn8aQ9WTU3 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Scn8aQ9WTU3 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC17.58■□□□□ 0.41
Scn8aQ9WTU3 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Scn8aQ9WTU3 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Scn8aQ9WTU3 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Scn8aQ9WTU3 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Scn8aQ9WTU3 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Scn8aQ9WTU3 Gm8969-201ENSMUST00000199694 526 ntBASIC17.58■□□□□ 0.4
Scn8aQ9WTU3 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC17.58■□□□□ 0.4
Scn8aQ9WTU3 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Scn8aQ9WTU3 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
Scn8aQ9WTU3 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC17.58■□□□□ 0.4
Scn8aQ9WTU3 Spsb2-203ENSMUST00000112473 1322 ntBASIC17.57■□□□□ 0.4
Scn8aQ9WTU3 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Scn8aQ9WTU3 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Scn8aQ9WTU3 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Scn8aQ9WTU3 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Scn8aQ9WTU3 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC17.57■□□□□ 0.4
Scn8aQ9WTU3 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Scn8aQ9WTU3 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Scn8aQ9WTU3 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Scn8aQ9WTU3 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Scn8aQ9WTU3 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Scn8aQ9WTU3 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Scn8aQ9WTU3 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Scn8aQ9WTU3 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Scn8aQ9WTU3 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Scn8aQ9WTU3 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Scn8aQ9WTU3 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Scn8aQ9WTU3 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Scn8aQ9WTU3 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC17.57■□□□□ 0.4
Scn8aQ9WTU3 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Scn8aQ9WTU3 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Scn8aQ9WTU3 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC17.57■□□□□ 0.4
Scn8aQ9WTU3 Mir1668-201ENSMUST00000184114 107 ntBASIC17.57■□□□□ 0.4
Scn8aQ9WTU3 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Scn8aQ9WTU3 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC17.56■□□□□ 0.4
Scn8aQ9WTU3 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Scn8aQ9WTU3 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC17.56■□□□□ 0.4
Scn8aQ9WTU3 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC17.56■□□□□ 0.4
Scn8aQ9WTU3 Fcho2-208ENSMUST00000224992 2964 ntBASIC17.56■□□□□ 0.4
Scn8aQ9WTU3 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Scn8aQ9WTU3 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Scn8aQ9WTU3 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Scn8aQ9WTU3 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 20.7 ms