Protein–RNA interactions for Protein: Q9R1K7

Tubd1, Tubulin delta chain, mousemouse

Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubd1Q9R1K7 Gm12085-201ENSMUST00000119263 940 ntBASIC17.76■□□□□ 0.43
Tubd1Q9R1K7 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Tubd1Q9R1K7 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC17.76■□□□□ 0.43
Tubd1Q9R1K7 Arhgef33-211ENSMUST00000225658 473 ntBASIC17.76■□□□□ 0.43
Tubd1Q9R1K7 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Tubd1Q9R1K7 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Tubd1Q9R1K7 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Tubd1Q9R1K7 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
Tubd1Q9R1K7 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Tubd1Q9R1K7 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC17.76■□□□□ 0.43
Tubd1Q9R1K7 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Tubd1Q9R1K7 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
Tubd1Q9R1K7 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Tubd1Q9R1K7 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Tubd1Q9R1K7 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Tubd1Q9R1K7 Tfap2a-209ENSMUST00000225180 1828 ntBASIC17.75■□□□□ 0.43
Tubd1Q9R1K7 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Tubd1Q9R1K7 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC17.75■□□□□ 0.43
Tubd1Q9R1K7 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Tubd1Q9R1K7 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Tubd1Q9R1K7 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Tubd1Q9R1K7 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC17.75■□□□□ 0.43
Tubd1Q9R1K7 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Tubd1Q9R1K7 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC17.75■□□□□ 0.43
Tubd1Q9R1K7 AC156016.1-201ENSMUST00000227190 1035 ntBASIC17.75■□□□□ 0.43
Tubd1Q9R1K7 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Tubd1Q9R1K7 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Tubd1Q9R1K7 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Tubd1Q9R1K7 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Tubd1Q9R1K7 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
Tubd1Q9R1K7 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Tubd1Q9R1K7 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC17.75■□□□□ 0.43
Tubd1Q9R1K7 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC17.75■□□□□ 0.43
Tubd1Q9R1K7 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Tubd1Q9R1K7 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Tubd1Q9R1K7 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Tubd1Q9R1K7 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Tubd1Q9R1K7 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Tubd1Q9R1K7 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Tubd1Q9R1K7 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Tubd1Q9R1K7 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Tubd1Q9R1K7 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Tubd1Q9R1K7 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Tubd1Q9R1K7 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC17.74■□□□□ 0.43
Tubd1Q9R1K7 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
Tubd1Q9R1K7 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC17.74■□□□□ 0.43
Tubd1Q9R1K7 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC17.74■□□□□ 0.43
Tubd1Q9R1K7 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC17.74■□□□□ 0.43
Tubd1Q9R1K7 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Tubd1Q9R1K7 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Tubd1Q9R1K7 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC17.74■□□□□ 0.43
Tubd1Q9R1K7 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Tubd1Q9R1K7 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Tubd1Q9R1K7 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC17.74■□□□□ 0.43
Tubd1Q9R1K7 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Tubd1Q9R1K7 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Tubd1Q9R1K7 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Tubd1Q9R1K7 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Tubd1Q9R1K7 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Tubd1Q9R1K7 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Tubd1Q9R1K7 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC17.73■□□□□ 0.43
Tubd1Q9R1K7 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC17.73■□□□□ 0.43
Tubd1Q9R1K7 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Tubd1Q9R1K7 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC17.73■□□□□ 0.43
Tubd1Q9R1K7 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Tubd1Q9R1K7 Otx2os1-204ENSMUST00000227221 751 ntBASIC17.73■□□□□ 0.43
Tubd1Q9R1K7 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Tubd1Q9R1K7 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Tubd1Q9R1K7 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC17.73■□□□□ 0.43
Tubd1Q9R1K7 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Tubd1Q9R1K7 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Tubd1Q9R1K7 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Tubd1Q9R1K7 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Tubd1Q9R1K7 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Tubd1Q9R1K7 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Tubd1Q9R1K7 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Tubd1Q9R1K7 Gm7638-201ENSMUST00000121348 967 ntBASIC17.72■□□□□ 0.43
Tubd1Q9R1K7 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Tubd1Q9R1K7 Gm9731-201ENSMUST00000209480 747 ntBASIC17.72■□□□□ 0.43
Tubd1Q9R1K7 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC17.72■□□□□ 0.43
Tubd1Q9R1K7 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC17.72■□□□□ 0.43
Tubd1Q9R1K7 Arhgef4-208ENSMUST00000211073 171 ntBASIC17.72■□□□□ 0.43
Tubd1Q9R1K7 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC17.72■□□□□ 0.43
Tubd1Q9R1K7 Il3ra-202ENSMUST00000223589 738 ntBASIC17.72■□□□□ 0.43
Tubd1Q9R1K7 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Tubd1Q9R1K7 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC17.72■□□□□ 0.43
Tubd1Q9R1K7 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Tubd1Q9R1K7 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Tubd1Q9R1K7 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Tubd1Q9R1K7 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Tubd1Q9R1K7 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC17.72■□□□□ 0.43
Tubd1Q9R1K7 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Tubd1Q9R1K7 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Tubd1Q9R1K7 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
Tubd1Q9R1K7 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Tubd1Q9R1K7 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Tubd1Q9R1K7 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Tubd1Q9R1K7 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Tubd1Q9R1K7 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Tubd1Q9R1K7 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 27.2 ms