Protein–RNA interactions for Protein: Q9QZS2

Rnf4, E3 ubiquitin-protein ligase RNF4, mousemouse

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf4Q9QZS2 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rnf4Q9QZS2 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC17.67■□□□□ 0.42
Rnf4Q9QZS2 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rnf4Q9QZS2 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC17.67■□□□□ 0.42
Rnf4Q9QZS2 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rnf4Q9QZS2 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC17.67■□□□□ 0.42
Rnf4Q9QZS2 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Rnf4Q9QZS2 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Rnf4Q9QZS2 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Rnf4Q9QZS2 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rnf4Q9QZS2 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Rnf4Q9QZS2 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC17.67■□□□□ 0.42
Rnf4Q9QZS2 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC17.67■□□□□ 0.42
Rnf4Q9QZS2 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Rnf4Q9QZS2 AC069562.2-201ENSMUST00000224644 2146 ntBASIC17.66■□□□□ 0.42
Rnf4Q9QZS2 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rnf4Q9QZS2 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rnf4Q9QZS2 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Rnf4Q9QZS2 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rnf4Q9QZS2 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Rnf4Q9QZS2 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rnf4Q9QZS2 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC17.66■□□□□ 0.42
Rnf4Q9QZS2 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Rnf4Q9QZS2 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rnf4Q9QZS2 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC17.66■□□□□ 0.42
Rnf4Q9QZS2 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Rnf4Q9QZS2 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rnf4Q9QZS2 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rnf4Q9QZS2 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rnf4Q9QZS2 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rnf4Q9QZS2 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Rnf4Q9QZS2 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Rnf4Q9QZS2 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rnf4Q9QZS2 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Rnf4Q9QZS2 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rnf4Q9QZS2 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rnf4Q9QZS2 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rnf4Q9QZS2 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rnf4Q9QZS2 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC17.65■□□□□ 0.42
Rnf4Q9QZS2 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Rnf4Q9QZS2 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rnf4Q9QZS2 AC125311.2-201ENSMUST00000227477 1940 ntBASIC17.65■□□□□ 0.42
Rnf4Q9QZS2 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rnf4Q9QZS2 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rnf4Q9QZS2 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Rnf4Q9QZS2 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Rnf4Q9QZS2 CT010467.1-202ENSMUST00000205406 714 ntBASIC17.65■□□□□ 0.42
Rnf4Q9QZS2 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rnf4Q9QZS2 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rnf4Q9QZS2 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rnf4Q9QZS2 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rnf4Q9QZS2 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rnf4Q9QZS2 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rnf4Q9QZS2 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rnf4Q9QZS2 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.42
Rnf4Q9QZS2 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.42
Rnf4Q9QZS2 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.42
Rnf4Q9QZS2 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.42
Rnf4Q9QZS2 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Rnf4Q9QZS2 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.42
Rnf4Q9QZS2 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Rnf4Q9QZS2 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rnf4Q9QZS2 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Rnf4Q9QZS2 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Rnf4Q9QZS2 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rnf4Q9QZS2 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rnf4Q9QZS2 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Rnf4Q9QZS2 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rnf4Q9QZS2 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rnf4Q9QZS2 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rnf4Q9QZS2 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC17.64■□□□□ 0.41
Rnf4Q9QZS2 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rnf4Q9QZS2 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rnf4Q9QZS2 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rnf4Q9QZS2 Gm8839-201ENSMUST00000121279 1645 ntBASIC17.64■□□□□ 0.41
Rnf4Q9QZS2 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Rnf4Q9QZS2 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Rnf4Q9QZS2 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
Rnf4Q9QZS2 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rnf4Q9QZS2 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Rnf4Q9QZS2 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Rnf4Q9QZS2 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rnf4Q9QZS2 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rnf4Q9QZS2 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rnf4Q9QZS2 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rnf4Q9QZS2 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC17.63■□□□□ 0.41
Rnf4Q9QZS2 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC17.63■□□□□ 0.41
Rnf4Q9QZS2 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
Rnf4Q9QZS2 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rnf4Q9QZS2 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC17.63■□□□□ 0.41
Rnf4Q9QZS2 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rnf4Q9QZS2 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rnf4Q9QZS2 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Rnf4Q9QZS2 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rnf4Q9QZS2 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC17.63■□□□□ 0.41
Rnf4Q9QZS2 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rnf4Q9QZS2 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Rnf4Q9QZS2 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rnf4Q9QZS2 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Rnf4Q9QZS2 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 30.9 ms