Protein–RNA interactions for Protein: Q9QY39

Pdzd4, PDZ domain-containing protein 4, mousemouse

Predictions only

Length 772 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdzd4Q9QY39 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
Pdzd4Q9QY39 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Pdzd4Q9QY39 Gm45606-201ENSMUST00000209836 2795 ntBASIC18.82■□□□□ 0.6
Pdzd4Q9QY39 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Pdzd4Q9QY39 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Pdzd4Q9QY39 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Pdzd4Q9QY39 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC18.82■□□□□ 0.6
Pdzd4Q9QY39 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Pdzd4Q9QY39 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC18.82■□□□□ 0.6
Pdzd4Q9QY39 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC18.82■□□□□ 0.6
Pdzd4Q9QY39 AC175538.1-201ENSMUST00000225343 1269 ntBASIC18.82■□□□□ 0.6
Pdzd4Q9QY39 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Pdzd4Q9QY39 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Pdzd4Q9QY39 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Pdzd4Q9QY39 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC18.82■□□□□ 0.6
Pdzd4Q9QY39 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Pdzd4Q9QY39 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Pdzd4Q9QY39 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Pdzd4Q9QY39 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Pdzd4Q9QY39 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC18.82■□□□□ 0.6
Pdzd4Q9QY39 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pdzd4Q9QY39 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pdzd4Q9QY39 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC18.81■□□□□ 0.6
Pdzd4Q9QY39 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pdzd4Q9QY39 Mir2861-201ENSMUST00000175539 82 ntBASIC18.81■□□□□ 0.6
Pdzd4Q9QY39 Mir7071-201ENSMUST00000184847 69 ntBASIC18.81■□□□□ 0.6
Pdzd4Q9QY39 Gm9484-201ENSMUST00000195892 1159 ntBASIC18.81■□□□□ 0.6
Pdzd4Q9QY39 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pdzd4Q9QY39 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pdzd4Q9QY39 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pdzd4Q9QY39 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pdzd4Q9QY39 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pdzd4Q9QY39 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pdzd4Q9QY39 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pdzd4Q9QY39 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pdzd4Q9QY39 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pdzd4Q9QY39 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pdzd4Q9QY39 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pdzd4Q9QY39 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pdzd4Q9QY39 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pdzd4Q9QY39 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Pdzd4Q9QY39 Gm37055-201ENSMUST00000191866 133 ntBASIC18.8■□□□□ 0.6
Pdzd4Q9QY39 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pdzd4Q9QY39 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pdzd4Q9QY39 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pdzd4Q9QY39 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pdzd4Q9QY39 AC124581.1-201ENSMUST00000225416 1399 ntBASIC18.8■□□□□ 0.6
Pdzd4Q9QY39 Idnk-204ENSMUST00000226010 1898 ntBASIC18.8■□□□□ 0.6
Pdzd4Q9QY39 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pdzd4Q9QY39 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pdzd4Q9QY39 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Pdzd4Q9QY39 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Pdzd4Q9QY39 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pdzd4Q9QY39 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Pdzd4Q9QY39 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Pdzd4Q9QY39 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Pdzd4Q9QY39 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Pdzd4Q9QY39 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
Pdzd4Q9QY39 AC166341.7-201ENSMUST00000221698 126 ntBASIC18.79■□□□□ 0.6
Pdzd4Q9QY39 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pdzd4Q9QY39 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pdzd4Q9QY39 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pdzd4Q9QY39 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pdzd4Q9QY39 AC108858.1-201ENSMUST00000228461 1498 ntBASIC18.78■□□□□ 0.6
Pdzd4Q9QY39 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pdzd4Q9QY39 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pdzd4Q9QY39 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pdzd4Q9QY39 Gm12382-201ENSMUST00000122005 922 ntBASIC18.78■□□□□ 0.6
Pdzd4Q9QY39 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Pdzd4Q9QY39 Gm8969-201ENSMUST00000199694 526 ntBASIC18.78■□□□□ 0.6
Pdzd4Q9QY39 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Pdzd4Q9QY39 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pdzd4Q9QY39 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Pdzd4Q9QY39 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC18.78■□□□□ 0.6
Pdzd4Q9QY39 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pdzd4Q9QY39 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Pdzd4Q9QY39 Gm37811-201ENSMUST00000192416 2601 ntBASIC18.78■□□□□ 0.6
Pdzd4Q9QY39 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pdzd4Q9QY39 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pdzd4Q9QY39 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pdzd4Q9QY39 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC18.77■□□□□ 0.6
Pdzd4Q9QY39 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Pdzd4Q9QY39 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Pdzd4Q9QY39 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Pdzd4Q9QY39 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Pdzd4Q9QY39 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
Pdzd4Q9QY39 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
Pdzd4Q9QY39 Mir5122-201ENSMUST00000175004 89 ntBASIC18.77■□□□□ 0.6
Pdzd4Q9QY39 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Pdzd4Q9QY39 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Pdzd4Q9QY39 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Pdzd4Q9QY39 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Pdzd4Q9QY39 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
Pdzd4Q9QY39 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Pdzd4Q9QY39 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Pdzd4Q9QY39 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.59
Pdzd4Q9QY39 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Pdzd4Q9QY39 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
Pdzd4Q9QY39 Fcho2-208ENSMUST00000224992 2964 ntBASIC18.76■□□□□ 0.59
Pdzd4Q9QY39 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC18.76■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 18.6 ms