Protein–RNA interactions for Protein: Q9QXZ7

Nr2e3, Photoreceptor-specific nuclear receptor, mousemouse

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr2e3Q9QXZ7 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Nr2e3Q9QXZ7 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Nr2e3Q9QXZ7 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Nr2e3Q9QXZ7 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Nr2e3Q9QXZ7 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Nr2e3Q9QXZ7 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Nr2e3Q9QXZ7 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC19.75■□□□□ 0.75
Nr2e3Q9QXZ7 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
Nr2e3Q9QXZ7 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC19.75■□□□□ 0.75
Nr2e3Q9QXZ7 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC19.75■□□□□ 0.75
Nr2e3Q9QXZ7 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Nr2e3Q9QXZ7 AC156016.1-201ENSMUST00000227190 1035 ntBASIC19.75■□□□□ 0.75
Nr2e3Q9QXZ7 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC19.75■□□□□ 0.75
Nr2e3Q9QXZ7 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
Nr2e3Q9QXZ7 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC19.75■□□□□ 0.75
Nr2e3Q9QXZ7 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Nr2e3Q9QXZ7 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Nr2e3Q9QXZ7 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Nr2e3Q9QXZ7 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Nr2e3Q9QXZ7 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC19.75■□□□□ 0.75
Nr2e3Q9QXZ7 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
Nr2e3Q9QXZ7 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Nr2e3Q9QXZ7 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Nr2e3Q9QXZ7 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC19.74■□□□□ 0.75
Nr2e3Q9QXZ7 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC19.74■□□□□ 0.75
Nr2e3Q9QXZ7 Otx2os1-204ENSMUST00000227221 751 ntBASIC19.74■□□□□ 0.75
Nr2e3Q9QXZ7 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Nr2e3Q9QXZ7 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Nr2e3Q9QXZ7 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Nr2e3Q9QXZ7 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Nr2e3Q9QXZ7 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Nr2e3Q9QXZ7 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Nr2e3Q9QXZ7 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Nr2e3Q9QXZ7 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
Nr2e3Q9QXZ7 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC19.73■□□□□ 0.75
Nr2e3Q9QXZ7 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Nr2e3Q9QXZ7 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
Nr2e3Q9QXZ7 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Nr2e3Q9QXZ7 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Nr2e3Q9QXZ7 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC19.73■□□□□ 0.75
Nr2e3Q9QXZ7 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Nr2e3Q9QXZ7 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Nr2e3Q9QXZ7 Timm23-208ENSMUST00000226683 750 ntBASIC19.73■□□□□ 0.75
Nr2e3Q9QXZ7 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Nr2e3Q9QXZ7 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Nr2e3Q9QXZ7 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
Nr2e3Q9QXZ7 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Nr2e3Q9QXZ7 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Nr2e3Q9QXZ7 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Nr2e3Q9QXZ7 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Nr2e3Q9QXZ7 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
Nr2e3Q9QXZ7 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Nr2e3Q9QXZ7 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
Nr2e3Q9QXZ7 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC19.72■□□□□ 0.75
Nr2e3Q9QXZ7 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Nr2e3Q9QXZ7 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC19.72■□□□□ 0.75
Nr2e3Q9QXZ7 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC19.72■□□□□ 0.75
Nr2e3Q9QXZ7 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Nr2e3Q9QXZ7 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Nr2e3Q9QXZ7 Gm9484-201ENSMUST00000195892 1159 ntBASIC19.72■□□□□ 0.75
Nr2e3Q9QXZ7 Gm21814-202ENSMUST00000203277 873 ntBASIC19.72■□□□□ 0.75
Nr2e3Q9QXZ7 Arhgef4-208ENSMUST00000211073 171 ntBASIC19.72■□□□□ 0.75
Nr2e3Q9QXZ7 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Nr2e3Q9QXZ7 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
Nr2e3Q9QXZ7 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Nr2e3Q9QXZ7 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Nr2e3Q9QXZ7 Gm19721-201ENSMUST00000195284 1764 ntBASIC19.72■□□□□ 0.75
Nr2e3Q9QXZ7 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Nr2e3Q9QXZ7 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC19.72■□□□□ 0.75
Nr2e3Q9QXZ7 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Nr2e3Q9QXZ7 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Nr2e3Q9QXZ7 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Nr2e3Q9QXZ7 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Nr2e3Q9QXZ7 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
Nr2e3Q9QXZ7 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Nr2e3Q9QXZ7 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC19.71■□□□□ 0.75
Nr2e3Q9QXZ7 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Nr2e3Q9QXZ7 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Nr2e3Q9QXZ7 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Nr2e3Q9QXZ7 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC19.71■□□□□ 0.75
Nr2e3Q9QXZ7 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Nr2e3Q9QXZ7 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC19.71■□□□□ 0.75
Nr2e3Q9QXZ7 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Nr2e3Q9QXZ7 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Nr2e3Q9QXZ7 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Nr2e3Q9QXZ7 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Nr2e3Q9QXZ7 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Nr2e3Q9QXZ7 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Nr2e3Q9QXZ7 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Nr2e3Q9QXZ7 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Nr2e3Q9QXZ7 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC19.7■□□□□ 0.74
Nr2e3Q9QXZ7 Odf3b-204ENSMUST00000227834 930 ntBASIC19.7■□□□□ 0.74
Nr2e3Q9QXZ7 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Nr2e3Q9QXZ7 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Nr2e3Q9QXZ7 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC19.7■□□□□ 0.74
Nr2e3Q9QXZ7 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Nr2e3Q9QXZ7 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Nr2e3Q9QXZ7 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Nr2e3Q9QXZ7 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Nr2e3Q9QXZ7 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 36.1 ms