Protein–RNA interactions for Protein: Q9QWF0

Chaf1a, Chromatin assembly factor 1 subunit A, mousemouse

Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chaf1aQ9QWF0 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Chaf1aQ9QWF0 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
Chaf1aQ9QWF0 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Chaf1aQ9QWF0 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Chaf1aQ9QWF0 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC19.54■□□□□ 0.72
Chaf1aQ9QWF0 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Chaf1aQ9QWF0 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Chaf1aQ9QWF0 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Chaf1aQ9QWF0 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Chaf1aQ9QWF0 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
Chaf1aQ9QWF0 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
Chaf1aQ9QWF0 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
Chaf1aQ9QWF0 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
Chaf1aQ9QWF0 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Chaf1aQ9QWF0 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Chaf1aQ9QWF0 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Chaf1aQ9QWF0 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC19.54■□□□□ 0.72
Chaf1aQ9QWF0 Gm45412-201ENSMUST00000210217 2275 ntBASIC19.54■□□□□ 0.72
Chaf1aQ9QWF0 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
Chaf1aQ9QWF0 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Chaf1aQ9QWF0 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Chaf1aQ9QWF0 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Chaf1aQ9QWF0 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Chaf1aQ9QWF0 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Chaf1aQ9QWF0 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
Chaf1aQ9QWF0 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Chaf1aQ9QWF0 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
Chaf1aQ9QWF0 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Chaf1aQ9QWF0 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Chaf1aQ9QWF0 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Chaf1aQ9QWF0 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Chaf1aQ9QWF0 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Chaf1aQ9QWF0 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
Chaf1aQ9QWF0 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
Chaf1aQ9QWF0 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Chaf1aQ9QWF0 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Chaf1aQ9QWF0 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC19.52■□□□□ 0.72
Chaf1aQ9QWF0 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Chaf1aQ9QWF0 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC19.52■□□□□ 0.72
Chaf1aQ9QWF0 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Chaf1aQ9QWF0 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Chaf1aQ9QWF0 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Chaf1aQ9QWF0 Gm13148-201ENSMUST00000118892 745 ntBASIC19.52■□□□□ 0.72
Chaf1aQ9QWF0 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC19.52■□□□□ 0.72
Chaf1aQ9QWF0 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Chaf1aQ9QWF0 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Chaf1aQ9QWF0 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Chaf1aQ9QWF0 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
Chaf1aQ9QWF0 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Chaf1aQ9QWF0 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Chaf1aQ9QWF0 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Chaf1aQ9QWF0 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Chaf1aQ9QWF0 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Chaf1aQ9QWF0 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Chaf1aQ9QWF0 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Chaf1aQ9QWF0 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
Chaf1aQ9QWF0 Gm37519-201ENSMUST00000191687 2210 ntBASIC19.51■□□□□ 0.71
Chaf1aQ9QWF0 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Chaf1aQ9QWF0 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Chaf1aQ9QWF0 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Chaf1aQ9QWF0 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
Chaf1aQ9QWF0 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
Chaf1aQ9QWF0 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Chaf1aQ9QWF0 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Chaf1aQ9QWF0 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC19.51■□□□□ 0.71
Chaf1aQ9QWF0 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Chaf1aQ9QWF0 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Chaf1aQ9QWF0 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Chaf1aQ9QWF0 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Chaf1aQ9QWF0 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Chaf1aQ9QWF0 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Chaf1aQ9QWF0 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC19.5■□□□□ 0.71
Chaf1aQ9QWF0 Gm5898-201ENSMUST00000121016 2071 ntBASIC19.5■□□□□ 0.71
Chaf1aQ9QWF0 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Chaf1aQ9QWF0 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Chaf1aQ9QWF0 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Chaf1aQ9QWF0 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Chaf1aQ9QWF0 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Chaf1aQ9QWF0 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC19.5■□□□□ 0.71
Chaf1aQ9QWF0 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC19.5■□□□□ 0.71
Chaf1aQ9QWF0 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
Chaf1aQ9QWF0 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC19.5■□□□□ 0.71
Chaf1aQ9QWF0 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC19.5■□□□□ 0.71
Chaf1aQ9QWF0 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
Chaf1aQ9QWF0 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
Chaf1aQ9QWF0 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
Chaf1aQ9QWF0 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Chaf1aQ9QWF0 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Chaf1aQ9QWF0 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Chaf1aQ9QWF0 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Chaf1aQ9QWF0 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Chaf1aQ9QWF0 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC19.5■□□□□ 0.71
Chaf1aQ9QWF0 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
Chaf1aQ9QWF0 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Chaf1aQ9QWF0 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Chaf1aQ9QWF0 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Chaf1aQ9QWF0 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Chaf1aQ9QWF0 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
Chaf1aQ9QWF0 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC19.49■□□□□ 0.71
Chaf1aQ9QWF0 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 22.3 ms