Protein–RNA interactions for Protein: Q9JL61

Rfx5, DNA-binding protein Rfx5, mousemouse

Predictions only

Length 658 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx5Q9JL61 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
Rfx5Q9JL61 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Rfx5Q9JL61 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Rfx5Q9JL61 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Rfx5Q9JL61 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Rfx5Q9JL61 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Rfx5Q9JL61 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Rfx5Q9JL61 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC18.47■□□□□ 0.55
Rfx5Q9JL61 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
Rfx5Q9JL61 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
Rfx5Q9JL61 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC18.46■□□□□ 0.55
Rfx5Q9JL61 Gm15565-201ENSMUST00000118890 427 ntBASIC18.46■□□□□ 0.55
Rfx5Q9JL61 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Rfx5Q9JL61 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Rfx5Q9JL61 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Rfx5Q9JL61 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
Rfx5Q9JL61 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC18.46■□□□□ 0.55
Rfx5Q9JL61 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
Rfx5Q9JL61 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC18.45■□□□□ 0.54
Rfx5Q9JL61 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Rfx5Q9JL61 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Rfx5Q9JL61 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Rfx5Q9JL61 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
Rfx5Q9JL61 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Rfx5Q9JL61 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Rfx5Q9JL61 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Rfx5Q9JL61 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Rfx5Q9JL61 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
Rfx5Q9JL61 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
Rfx5Q9JL61 Gm7638-201ENSMUST00000121348 967 ntBASIC18.45■□□□□ 0.54
Rfx5Q9JL61 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC18.45■□□□□ 0.54
Rfx5Q9JL61 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC18.45■□□□□ 0.54
Rfx5Q9JL61 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Rfx5Q9JL61 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC18.45■□□□□ 0.54
Rfx5Q9JL61 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC18.45■□□□□ 0.54
Rfx5Q9JL61 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Rfx5Q9JL61 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Rfx5Q9JL61 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Rfx5Q9JL61 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Rfx5Q9JL61 Gm19439-201ENSMUST00000198195 2273 ntBASIC18.44■□□□□ 0.54
Rfx5Q9JL61 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Rfx5Q9JL61 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Rfx5Q9JL61 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Rfx5Q9JL61 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Rfx5Q9JL61 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC18.44■□□□□ 0.54
Rfx5Q9JL61 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC18.44■□□□□ 0.54
Rfx5Q9JL61 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Rfx5Q9JL61 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Rfx5Q9JL61 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Rfx5Q9JL61 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Rfx5Q9JL61 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Rfx5Q9JL61 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Rfx5Q9JL61 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC18.44■□□□□ 0.54
Rfx5Q9JL61 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Rfx5Q9JL61 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Rfx5Q9JL61 Gm45606-201ENSMUST00000209836 2795 ntBASIC18.43■□□□□ 0.54
Rfx5Q9JL61 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
Rfx5Q9JL61 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC18.43■□□□□ 0.54
Rfx5Q9JL61 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Rfx5Q9JL61 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Rfx5Q9JL61 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
Rfx5Q9JL61 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC18.43■□□□□ 0.54
Rfx5Q9JL61 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Rfx5Q9JL61 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC18.43■□□□□ 0.54
Rfx5Q9JL61 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Rfx5Q9JL61 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
Rfx5Q9JL61 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Rfx5Q9JL61 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC18.43■□□□□ 0.54
Rfx5Q9JL61 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC18.43■□□□□ 0.54
Rfx5Q9JL61 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Rfx5Q9JL61 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC18.42■□□□□ 0.54
Rfx5Q9JL61 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Rfx5Q9JL61 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
Rfx5Q9JL61 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Rfx5Q9JL61 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Rfx5Q9JL61 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC18.42■□□□□ 0.54
Rfx5Q9JL61 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC18.42■□□□□ 0.54
Rfx5Q9JL61 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Rfx5Q9JL61 Gm30025-201ENSMUST00000218555 728 ntBASIC18.42■□□□□ 0.54
Rfx5Q9JL61 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC18.42■□□□□ 0.54
Rfx5Q9JL61 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Rfx5Q9JL61 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
Rfx5Q9JL61 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Rfx5Q9JL61 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC18.42■□□□□ 0.54
Rfx5Q9JL61 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC18.42■□□□□ 0.54
Rfx5Q9JL61 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Rfx5Q9JL61 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Rfx5Q9JL61 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Rfx5Q9JL61 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Rfx5Q9JL61 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
Rfx5Q9JL61 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Rfx5Q9JL61 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC18.41■□□□□ 0.54
Rfx5Q9JL61 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC18.41■□□□□ 0.54
Rfx5Q9JL61 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Rfx5Q9JL61 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC18.41■□□□□ 0.54
Rfx5Q9JL61 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Rfx5Q9JL61 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
Rfx5Q9JL61 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Rfx5Q9JL61 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
Rfx5Q9JL61 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 37 ms