Protein–RNA interactions for Protein: Q9JJ43

Rbfox1, RNA binding protein fox-1 homolog 1, mousemouse

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rbfox1Q9JJ43 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Rbfox1Q9JJ43 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Rbfox1Q9JJ43 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Rbfox1Q9JJ43 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Rbfox1Q9JJ43 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Rbfox1Q9JJ43 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
Rbfox1Q9JJ43 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Rbfox1Q9JJ43 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Rbfox1Q9JJ43 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC14.89□□□□□ -0.03
Rbfox1Q9JJ43 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Rbfox1Q9JJ43 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Rbfox1Q9JJ43 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Rbfox1Q9JJ43 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Rbfox1Q9JJ43 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC14.89□□□□□ -0.03
Rbfox1Q9JJ43 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC14.89□□□□□ -0.03
Rbfox1Q9JJ43 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Rbfox1Q9JJ43 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Rbfox1Q9JJ43 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Rbfox1Q9JJ43 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Rbfox1Q9JJ43 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Rbfox1Q9JJ43 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Rbfox1Q9JJ43 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Rbfox1Q9JJ43 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Rbfox1Q9JJ43 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Rbfox1Q9JJ43 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC14.89□□□□□ -0.03
Rbfox1Q9JJ43 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Rbfox1Q9JJ43 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Rbfox1Q9JJ43 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
Rbfox1Q9JJ43 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Rbfox1Q9JJ43 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Rbfox1Q9JJ43 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Rbfox1Q9JJ43 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Rbfox1Q9JJ43 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Rbfox1Q9JJ43 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Rbfox1Q9JJ43 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC14.88□□□□□ -0.03
Rbfox1Q9JJ43 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Rbfox1Q9JJ43 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Rbfox1Q9JJ43 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC14.88□□□□□ -0.03
Rbfox1Q9JJ43 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Rbfox1Q9JJ43 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Rbfox1Q9JJ43 Gm18284-201ENSMUST00000172604 624 ntBASIC14.88□□□□□ -0.03
Rbfox1Q9JJ43 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Rbfox1Q9JJ43 Gm26524-201ENSMUST00000192339 390 ntBASIC14.88□□□□□ -0.03
Rbfox1Q9JJ43 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Rbfox1Q9JJ43 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Rbfox1Q9JJ43 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Rbfox1Q9JJ43 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Rbfox1Q9JJ43 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC14.88□□□□□ -0.03
Rbfox1Q9JJ43 Gm42918-201ENSMUST00000199249 1580 ntBASIC14.88□□□□□ -0.03
Rbfox1Q9JJ43 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Rbfox1Q9JJ43 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Rbfox1Q9JJ43 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC14.88□□□□□ -0.03
Rbfox1Q9JJ43 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Rbfox1Q9JJ43 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC14.87□□□□□ -0.03
Rbfox1Q9JJ43 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC14.87□□□□□ -0.03
Rbfox1Q9JJ43 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Rbfox1Q9JJ43 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Rbfox1Q9JJ43 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Rbfox1Q9JJ43 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Rbfox1Q9JJ43 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Rbfox1Q9JJ43 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Rbfox1Q9JJ43 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Rbfox1Q9JJ43 Mir2861-201ENSMUST00000175539 82 ntBASIC14.87□□□□□ -0.03
Rbfox1Q9JJ43 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC14.87□□□□□ -0.03
Rbfox1Q9JJ43 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Rbfox1Q9JJ43 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Rbfox1Q9JJ43 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Rbfox1Q9JJ43 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Rbfox1Q9JJ43 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Rbfox1Q9JJ43 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Rbfox1Q9JJ43 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Rbfox1Q9JJ43 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Rbfox1Q9JJ43 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Rbfox1Q9JJ43 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Rbfox1Q9JJ43 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Rbfox1Q9JJ43 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC14.86□□□□□ -0.03
Rbfox1Q9JJ43 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Rbfox1Q9JJ43 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Rbfox1Q9JJ43 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Rbfox1Q9JJ43 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Rbfox1Q9JJ43 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC14.86□□□□□ -0.03
Rbfox1Q9JJ43 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Rbfox1Q9JJ43 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Rbfox1Q9JJ43 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC14.86□□□□□ -0.03
Rbfox1Q9JJ43 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Rbfox1Q9JJ43 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC14.86□□□□□ -0.03
Rbfox1Q9JJ43 Gm11643-201ENSMUST00000119578 864 ntBASIC14.86□□□□□ -0.03
Rbfox1Q9JJ43 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Rbfox1Q9JJ43 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC14.86□□□□□ -0.03
Rbfox1Q9JJ43 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
Rbfox1Q9JJ43 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Rbfox1Q9JJ43 Gm43338-201ENSMUST00000198617 2223 ntBASIC14.86□□□□□ -0.03
Rbfox1Q9JJ43 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Rbfox1Q9JJ43 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Rbfox1Q9JJ43 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Rbfox1Q9JJ43 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Rbfox1Q9JJ43 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Rbfox1Q9JJ43 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Rbfox1Q9JJ43 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Rbfox1Q9JJ43 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 25.2 ms