Protein–RNA interactions for Protein: Q9ES97

Rtn3, Reticulon-3, mousemouse

Predictions only

Length 964 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn3Q9ES97 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rtn3Q9ES97 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rtn3Q9ES97 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC18.6■□□□□ 0.57
Rtn3Q9ES97 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
Rtn3Q9ES97 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rtn3Q9ES97 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rtn3Q9ES97 Gm10461-201ENSMUST00000202073 4786 ntBASIC18.6■□□□□ 0.57
Rtn3Q9ES97 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC18.6■□□□□ 0.57
Rtn3Q9ES97 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rtn3Q9ES97 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rtn3Q9ES97 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rtn3Q9ES97 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rtn3Q9ES97 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Rtn3Q9ES97 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rtn3Q9ES97 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rtn3Q9ES97 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
Rtn3Q9ES97 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC18.59■□□□□ 0.57
Rtn3Q9ES97 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rtn3Q9ES97 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rtn3Q9ES97 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rtn3Q9ES97 Gm43294-201ENSMUST00000202850 2490 ntBASIC18.59■□□□□ 0.57
Rtn3Q9ES97 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rtn3Q9ES97 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rtn3Q9ES97 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rtn3Q9ES97 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Rtn3Q9ES97 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rtn3Q9ES97 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rtn3Q9ES97 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rtn3Q9ES97 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC18.59■□□□□ 0.57
Rtn3Q9ES97 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rtn3Q9ES97 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Rtn3Q9ES97 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Rtn3Q9ES97 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC18.59■□□□□ 0.57
Rtn3Q9ES97 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
Rtn3Q9ES97 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rtn3Q9ES97 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Rtn3Q9ES97 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.57
Rtn3Q9ES97 Nrn1-203ENSMUST00000223611 1443 ntBASIC18.58■□□□□ 0.57
Rtn3Q9ES97 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
Rtn3Q9ES97 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Rtn3Q9ES97 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Rtn3Q9ES97 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
Rtn3Q9ES97 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Rtn3Q9ES97 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Rtn3Q9ES97 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
Rtn3Q9ES97 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Rtn3Q9ES97 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Rtn3Q9ES97 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rtn3Q9ES97 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rtn3Q9ES97 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rtn3Q9ES97 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rtn3Q9ES97 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
Rtn3Q9ES97 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rtn3Q9ES97 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rtn3Q9ES97 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rtn3Q9ES97 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rtn3Q9ES97 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Rtn3Q9ES97 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Rtn3Q9ES97 Gm10252-201ENSMUST00000209541 832 ntBASIC18.57■□□□□ 0.56
Rtn3Q9ES97 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rtn3Q9ES97 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC18.57■□□□□ 0.56
Rtn3Q9ES97 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rtn3Q9ES97 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC18.57■□□□□ 0.56
Rtn3Q9ES97 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rtn3Q9ES97 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Rtn3Q9ES97 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rtn3Q9ES97 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Rtn3Q9ES97 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rtn3Q9ES97 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rtn3Q9ES97 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
Rtn3Q9ES97 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rtn3Q9ES97 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC18.56■□□□□ 0.56
Rtn3Q9ES97 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
Rtn3Q9ES97 Gm11927-201ENSMUST00000118472 759 ntBASIC18.56■□□□□ 0.56
Rtn3Q9ES97 Gm15378-201ENSMUST00000121894 207 ntBASIC18.56■□□□□ 0.56
Rtn3Q9ES97 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC18.56■□□□□ 0.56
Rtn3Q9ES97 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Rtn3Q9ES97 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC18.56■□□□□ 0.56
Rtn3Q9ES97 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC18.56■□□□□ 0.56
Rtn3Q9ES97 Zfp783-201ENSMUST00000095946 670 ntBASIC18.56■□□□□ 0.56
Rtn3Q9ES97 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rtn3Q9ES97 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rtn3Q9ES97 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC18.56■□□□□ 0.56
Rtn3Q9ES97 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Rtn3Q9ES97 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rtn3Q9ES97 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rtn3Q9ES97 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rtn3Q9ES97 H2-K2-201ENSMUST00000174250 1049 ntBASIC18.55■□□□□ 0.56
Rtn3Q9ES97 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
Rtn3Q9ES97 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rtn3Q9ES97 Gm38285-201ENSMUST00000192928 922 ntBASIC18.55■□□□□ 0.56
Rtn3Q9ES97 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC18.55■□□□□ 0.56
Rtn3Q9ES97 Arhgef33-211ENSMUST00000225658 473 ntBASIC18.55■□□□□ 0.56
Rtn3Q9ES97 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
Rtn3Q9ES97 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rtn3Q9ES97 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rtn3Q9ES97 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rtn3Q9ES97 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Rtn3Q9ES97 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Rtn3Q9ES97 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 38.3 ms