Protein–RNA interactions for Protein: Q9ERD7

Tubb3, Tubulin beta-3 chain, mousemouse

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubb3Q9ERD7 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Tubb3Q9ERD7 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC17.36■□□□□ 0.37
Tubb3Q9ERD7 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
Tubb3Q9ERD7 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Tubb3Q9ERD7 Gm22325-201ENSMUST00000158904 308 ntBASIC17.36■□□□□ 0.37
Tubb3Q9ERD7 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Tubb3Q9ERD7 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Tubb3Q9ERD7 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Tubb3Q9ERD7 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Tubb3Q9ERD7 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Tubb3Q9ERD7 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Tubb3Q9ERD7 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Tubb3Q9ERD7 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC17.36■□□□□ 0.37
Tubb3Q9ERD7 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Tubb3Q9ERD7 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Tubb3Q9ERD7 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Tubb3Q9ERD7 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC17.35■□□□□ 0.37
Tubb3Q9ERD7 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Tubb3Q9ERD7 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Tubb3Q9ERD7 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Tubb3Q9ERD7 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Tubb3Q9ERD7 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC17.35■□□□□ 0.37
Tubb3Q9ERD7 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Tubb3Q9ERD7 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Tubb3Q9ERD7 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Tubb3Q9ERD7 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Tubb3Q9ERD7 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC17.35■□□□□ 0.37
Tubb3Q9ERD7 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Tubb3Q9ERD7 Gm13181-201ENSMUST00000120117 1069 ntBASIC17.34■□□□□ 0.37
Tubb3Q9ERD7 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Tubb3Q9ERD7 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Tubb3Q9ERD7 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Tubb3Q9ERD7 Gm45774-201ENSMUST00000211992 2665 ntBASIC17.34■□□□□ 0.37
Tubb3Q9ERD7 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Tubb3Q9ERD7 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Tubb3Q9ERD7 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Tubb3Q9ERD7 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Tubb3Q9ERD7 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Tubb3Q9ERD7 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC17.34■□□□□ 0.37
Tubb3Q9ERD7 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Tubb3Q9ERD7 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Tubb3Q9ERD7 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Tubb3Q9ERD7 Flg-201ENSMUST00000050758 1488 ntBASIC17.33■□□□□ 0.37
Tubb3Q9ERD7 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Tubb3Q9ERD7 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Tubb3Q9ERD7 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Tubb3Q9ERD7 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Tubb3Q9ERD7 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC17.33■□□□□ 0.36
Tubb3Q9ERD7 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC17.33■□□□□ 0.36
Tubb3Q9ERD7 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC17.33■□□□□ 0.36
Tubb3Q9ERD7 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Tubb3Q9ERD7 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Tubb3Q9ERD7 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Tubb3Q9ERD7 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Tubb3Q9ERD7 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Tubb3Q9ERD7 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
Tubb3Q9ERD7 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Tubb3Q9ERD7 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC17.33■□□□□ 0.36
Tubb3Q9ERD7 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
Tubb3Q9ERD7 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Tubb3Q9ERD7 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Tubb3Q9ERD7 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Tubb3Q9ERD7 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Tubb3Q9ERD7 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC17.32■□□□□ 0.36
Tubb3Q9ERD7 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Tubb3Q9ERD7 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Tubb3Q9ERD7 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Tubb3Q9ERD7 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC17.32■□□□□ 0.36
Tubb3Q9ERD7 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Tubb3Q9ERD7 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Tubb3Q9ERD7 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Tubb3Q9ERD7 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC17.32■□□□□ 0.36
Tubb3Q9ERD7 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Tubb3Q9ERD7 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Tubb3Q9ERD7 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC17.31■□□□□ 0.36
Tubb3Q9ERD7 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Tubb3Q9ERD7 Nrn1-203ENSMUST00000223611 1443 ntBASIC17.31■□□□□ 0.36
Tubb3Q9ERD7 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC17.31■□□□□ 0.36
Tubb3Q9ERD7 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Tubb3Q9ERD7 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Tubb3Q9ERD7 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Tubb3Q9ERD7 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Tubb3Q9ERD7 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC17.31■□□□□ 0.36
Tubb3Q9ERD7 Wnt10b-205ENSMUST00000226846 1204 ntBASIC17.31■□□□□ 0.36
Tubb3Q9ERD7 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Tubb3Q9ERD7 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
Tubb3Q9ERD7 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Tubb3Q9ERD7 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Tubb3Q9ERD7 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC17.31■□□□□ 0.36
Tubb3Q9ERD7 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
Tubb3Q9ERD7 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Tubb3Q9ERD7 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Tubb3Q9ERD7 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC17.3■□□□□ 0.36
Tubb3Q9ERD7 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Tubb3Q9ERD7 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC17.3■□□□□ 0.36
Tubb3Q9ERD7 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Tubb3Q9ERD7 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Tubb3Q9ERD7 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Tubb3Q9ERD7 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Tubb3Q9ERD7 Gm13158-201ENSMUST00000122007 736 ntBASIC17.3■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 47.8 ms