Protein–RNA interactions for Protein: Q9EQU3

Tlr9, Toll-like receptor 9, mousemouse

Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tlr9Q9EQU3 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
Tlr9Q9EQU3 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Tlr9Q9EQU3 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Tlr9Q9EQU3 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Tlr9Q9EQU3 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
Tlr9Q9EQU3 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
Tlr9Q9EQU3 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Tlr9Q9EQU3 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC18.32■□□□□ 0.52
Tlr9Q9EQU3 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Tlr9Q9EQU3 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Tlr9Q9EQU3 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Tlr9Q9EQU3 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Tlr9Q9EQU3 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
Tlr9Q9EQU3 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Tlr9Q9EQU3 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Tlr9Q9EQU3 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Tlr9Q9EQU3 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Tlr9Q9EQU3 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Tlr9Q9EQU3 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Tlr9Q9EQU3 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Tlr9Q9EQU3 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Tlr9Q9EQU3 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Tlr9Q9EQU3 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Tlr9Q9EQU3 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Tlr9Q9EQU3 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Tlr9Q9EQU3 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Tlr9Q9EQU3 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Tlr9Q9EQU3 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Tlr9Q9EQU3 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC18.31■□□□□ 0.52
Tlr9Q9EQU3 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC18.31■□□□□ 0.52
Tlr9Q9EQU3 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Tlr9Q9EQU3 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Tlr9Q9EQU3 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Tlr9Q9EQU3 Gm38345-201ENSMUST00000192635 1748 ntBASIC18.31■□□□□ 0.52
Tlr9Q9EQU3 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Tlr9Q9EQU3 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Tlr9Q9EQU3 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Tlr9Q9EQU3 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Tlr9Q9EQU3 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Tlr9Q9EQU3 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Tlr9Q9EQU3 Gm10461-201ENSMUST00000202073 4786 ntBASIC18.3■□□□□ 0.52
Tlr9Q9EQU3 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Tlr9Q9EQU3 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Tlr9Q9EQU3 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC18.3■□□□□ 0.52
Tlr9Q9EQU3 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Tlr9Q9EQU3 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Tlr9Q9EQU3 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Tlr9Q9EQU3 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Tlr9Q9EQU3 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC18.3■□□□□ 0.52
Tlr9Q9EQU3 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC18.3■□□□□ 0.52
Tlr9Q9EQU3 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC18.3■□□□□ 0.52
Tlr9Q9EQU3 Zcchc6-207ENSMUST00000225576 2499 ntBASIC18.3■□□□□ 0.52
Tlr9Q9EQU3 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Tlr9Q9EQU3 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Tlr9Q9EQU3 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC18.3■□□□□ 0.52
Tlr9Q9EQU3 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Tlr9Q9EQU3 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC18.3■□□□□ 0.52
Tlr9Q9EQU3 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Tlr9Q9EQU3 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
Tlr9Q9EQU3 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Tlr9Q9EQU3 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Tlr9Q9EQU3 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Tlr9Q9EQU3 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Tlr9Q9EQU3 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC18.29■□□□□ 0.52
Tlr9Q9EQU3 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC18.29■□□□□ 0.52
Tlr9Q9EQU3 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Tlr9Q9EQU3 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC18.29■□□□□ 0.52
Tlr9Q9EQU3 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Tlr9Q9EQU3 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC18.29■□□□□ 0.52
Tlr9Q9EQU3 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Tlr9Q9EQU3 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Tlr9Q9EQU3 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Tlr9Q9EQU3 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Tlr9Q9EQU3 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Tlr9Q9EQU3 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Tlr9Q9EQU3 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
Tlr9Q9EQU3 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Tlr9Q9EQU3 Gm15847-201ENSMUST00000121417 1065 ntBASIC18.28■□□□□ 0.52
Tlr9Q9EQU3 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
Tlr9Q9EQU3 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC18.28■□□□□ 0.52
Tlr9Q9EQU3 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
Tlr9Q9EQU3 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Tlr9Q9EQU3 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Tlr9Q9EQU3 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Tlr9Q9EQU3 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Tlr9Q9EQU3 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Tlr9Q9EQU3 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Tlr9Q9EQU3 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
Tlr9Q9EQU3 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Tlr9Q9EQU3 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Tlr9Q9EQU3 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Tlr9Q9EQU3 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Tlr9Q9EQU3 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Tlr9Q9EQU3 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC18.28■□□□□ 0.52
Tlr9Q9EQU3 Fcho2-208ENSMUST00000224992 2964 ntBASIC18.27■□□□□ 0.52
Tlr9Q9EQU3 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Tlr9Q9EQU3 Gm21596-201ENSMUST00000178049 1316 ntBASIC18.27■□□□□ 0.52
Tlr9Q9EQU3 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Tlr9Q9EQU3 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Tlr9Q9EQU3 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 21.2 ms