Protein–RNA interactions for Protein: Q9EQH3

Vps35, Vacuolar protein sorting-associated protein 35, mousemouse

Known RBP Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps35Q9EQH3 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC17.46■□□□□ 0.39
Vps35Q9EQH3 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Vps35Q9EQH3 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC17.46■□□□□ 0.39
Vps35Q9EQH3 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
Vps35Q9EQH3 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC17.46■□□□□ 0.39
Vps35Q9EQH3 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC17.46■□□□□ 0.39
Vps35Q9EQH3 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Vps35Q9EQH3 Gm37292-201ENSMUST00000192062 758 ntBASIC17.46■□□□□ 0.39
Vps35Q9EQH3 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC17.46■□□□□ 0.39
Vps35Q9EQH3 AC154649.1-201ENSMUST00000227392 384 ntBASIC17.46■□□□□ 0.39
Vps35Q9EQH3 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Vps35Q9EQH3 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC17.46■□□□□ 0.39
Vps35Q9EQH3 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
Vps35Q9EQH3 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Vps35Q9EQH3 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Vps35Q9EQH3 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
Vps35Q9EQH3 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Vps35Q9EQH3 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Vps35Q9EQH3 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Vps35Q9EQH3 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Vps35Q9EQH3 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC17.45■□□□□ 0.38
Vps35Q9EQH3 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Vps35Q9EQH3 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Vps35Q9EQH3 Gm37194-201ENSMUST00000193092 3031 ntBASIC17.45■□□□□ 0.38
Vps35Q9EQH3 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Vps35Q9EQH3 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Vps35Q9EQH3 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Vps35Q9EQH3 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC17.45■□□□□ 0.38
Vps35Q9EQH3 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Vps35Q9EQH3 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC17.45■□□□□ 0.38
Vps35Q9EQH3 Gm43183-201ENSMUST00000200632 547 ntBASIC17.45■□□□□ 0.38
Vps35Q9EQH3 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC17.45■□□□□ 0.38
Vps35Q9EQH3 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Vps35Q9EQH3 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Vps35Q9EQH3 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Vps35Q9EQH3 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Vps35Q9EQH3 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC17.45■□□□□ 0.38
Vps35Q9EQH3 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Vps35Q9EQH3 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Vps35Q9EQH3 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Vps35Q9EQH3 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC17.44■□□□□ 0.38
Vps35Q9EQH3 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC17.44■□□□□ 0.38
Vps35Q9EQH3 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Vps35Q9EQH3 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Vps35Q9EQH3 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Vps35Q9EQH3 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Vps35Q9EQH3 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC17.44■□□□□ 0.38
Vps35Q9EQH3 Gm29791-202ENSMUST00000207888 369 ntBASIC17.44■□□□□ 0.38
Vps35Q9EQH3 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Vps35Q9EQH3 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Vps35Q9EQH3 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Vps35Q9EQH3 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC17.44■□□□□ 0.38
Vps35Q9EQH3 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Vps35Q9EQH3 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Vps35Q9EQH3 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Vps35Q9EQH3 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Vps35Q9EQH3 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Vps35Q9EQH3 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Vps35Q9EQH3 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC17.43■□□□□ 0.38
Vps35Q9EQH3 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Vps35Q9EQH3 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC17.43■□□□□ 0.38
Vps35Q9EQH3 Gm12382-201ENSMUST00000122005 922 ntBASIC17.43■□□□□ 0.38
Vps35Q9EQH3 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Vps35Q9EQH3 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Vps35Q9EQH3 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC17.43■□□□□ 0.38
Vps35Q9EQH3 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC17.43■□□□□ 0.38
Vps35Q9EQH3 AC153881.1-201ENSMUST00000214448 284 ntBASIC17.43■□□□□ 0.38
Vps35Q9EQH3 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Vps35Q9EQH3 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Vps35Q9EQH3 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Vps35Q9EQH3 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Vps35Q9EQH3 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Vps35Q9EQH3 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Vps35Q9EQH3 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Vps35Q9EQH3 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC17.43■□□□□ 0.38
Vps35Q9EQH3 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Vps35Q9EQH3 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Vps35Q9EQH3 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Vps35Q9EQH3 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Vps35Q9EQH3 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Vps35Q9EQH3 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Vps35Q9EQH3 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Vps35Q9EQH3 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Vps35Q9EQH3 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Vps35Q9EQH3 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Vps35Q9EQH3 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Vps35Q9EQH3 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC17.42■□□□□ 0.38
Vps35Q9EQH3 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Vps35Q9EQH3 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC17.42■□□□□ 0.38
Vps35Q9EQH3 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Vps35Q9EQH3 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Vps35Q9EQH3 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Vps35Q9EQH3 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Vps35Q9EQH3 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Vps35Q9EQH3 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC17.42■□□□□ 0.38
Vps35Q9EQH3 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Vps35Q9EQH3 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Vps35Q9EQH3 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC17.42■□□□□ 0.38
Vps35Q9EQH3 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Vps35Q9EQH3 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms