Protein–RNA interactions for Protein: Q9EPU0

Upf1, Regulator of nonsense transcripts 1, mousemouse

Known RBP Predictions only

Length 1,124 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf1Q9EPU0 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
Upf1Q9EPU0 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC19.94■□□□□ 0.78
Upf1Q9EPU0 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Upf1Q9EPU0 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC19.94■□□□□ 0.78
Upf1Q9EPU0 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Upf1Q9EPU0 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
Upf1Q9EPU0 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC19.94■□□□□ 0.78
Upf1Q9EPU0 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Upf1Q9EPU0 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Upf1Q9EPU0 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Upf1Q9EPU0 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
Upf1Q9EPU0 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Upf1Q9EPU0 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Upf1Q9EPU0 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Upf1Q9EPU0 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Upf1Q9EPU0 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Upf1Q9EPU0 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Upf1Q9EPU0 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
Upf1Q9EPU0 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Upf1Q9EPU0 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Upf1Q9EPU0 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
Upf1Q9EPU0 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC19.93■□□□□ 0.78
Upf1Q9EPU0 Gm5745-201ENSMUST00000183748 313 ntBASIC19.93■□□□□ 0.78
Upf1Q9EPU0 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Upf1Q9EPU0 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Upf1Q9EPU0 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Upf1Q9EPU0 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Upf1Q9EPU0 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Upf1Q9EPU0 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Upf1Q9EPU0 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Upf1Q9EPU0 Gm12504-201ENSMUST00000120860 2231 ntBASIC19.92■□□□□ 0.78
Upf1Q9EPU0 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Upf1Q9EPU0 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
Upf1Q9EPU0 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC19.92■□□□□ 0.78
Upf1Q9EPU0 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Upf1Q9EPU0 Gm13312-201ENSMUST00000119631 718 ntBASIC19.92■□□□□ 0.78
Upf1Q9EPU0 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Upf1Q9EPU0 Chchd1-203ENSMUST00000224633 557 ntBASIC19.92■□□□□ 0.78
Upf1Q9EPU0 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Upf1Q9EPU0 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC19.92■□□□□ 0.78
Upf1Q9EPU0 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC19.92■□□□□ 0.78
Upf1Q9EPU0 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Upf1Q9EPU0 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC19.92■□□□□ 0.78
Upf1Q9EPU0 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Upf1Q9EPU0 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
Upf1Q9EPU0 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Upf1Q9EPU0 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Upf1Q9EPU0 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Upf1Q9EPU0 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Upf1Q9EPU0 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC19.91■□□□□ 0.78
Upf1Q9EPU0 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Upf1Q9EPU0 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Upf1Q9EPU0 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Upf1Q9EPU0 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
Upf1Q9EPU0 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Upf1Q9EPU0 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Upf1Q9EPU0 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Upf1Q9EPU0 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC19.9■□□□□ 0.78
Upf1Q9EPU0 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Upf1Q9EPU0 Gm11336-201ENSMUST00000118168 334 ntBASIC19.9■□□□□ 0.78
Upf1Q9EPU0 Gm7230-201ENSMUST00000173026 815 ntBASIC19.9■□□□□ 0.78
Upf1Q9EPU0 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC19.9■□□□□ 0.78
Upf1Q9EPU0 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC19.9■□□□□ 0.78
Upf1Q9EPU0 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Upf1Q9EPU0 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
Upf1Q9EPU0 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC19.89■□□□□ 0.78
Upf1Q9EPU0 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
Upf1Q9EPU0 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
Upf1Q9EPU0 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Upf1Q9EPU0 Gnb4-208ENSMUST00000193050 423 ntTSL 5 BASIC19.89■□□□□ 0.77
Upf1Q9EPU0 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC19.89■□□□□ 0.77
Upf1Q9EPU0 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Upf1Q9EPU0 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Upf1Q9EPU0 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC19.89■□□□□ 0.77
Upf1Q9EPU0 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC19.88■□□□□ 0.77
Upf1Q9EPU0 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Upf1Q9EPU0 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Upf1Q9EPU0 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC19.88■□□□□ 0.77
Upf1Q9EPU0 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Upf1Q9EPU0 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Upf1Q9EPU0 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Upf1Q9EPU0 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Upf1Q9EPU0 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Upf1Q9EPU0 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC19.88■□□□□ 0.77
Upf1Q9EPU0 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Upf1Q9EPU0 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Upf1Q9EPU0 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Upf1Q9EPU0 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Upf1Q9EPU0 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC19.88■□□□□ 0.77
Upf1Q9EPU0 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Upf1Q9EPU0 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Upf1Q9EPU0 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Upf1Q9EPU0 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC19.87■□□□□ 0.77
Upf1Q9EPU0 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Upf1Q9EPU0 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Upf1Q9EPU0 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Upf1Q9EPU0 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Upf1Q9EPU0 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
Upf1Q9EPU0 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Upf1Q9EPU0 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 33 ms