Protein–RNA interactions for Protein: Q9D8B4

Ndufa11, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 11, mousemouse

Predictions only

Length 141 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndufa11Q9D8B4 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Ndufa11Q9D8B4 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ndufa11Q9D8B4 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ndufa11Q9D8B4 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Ndufa11Q9D8B4 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ndufa11Q9D8B4 Gm9885-202ENSMUST00000186234 2209 ntBASIC15.09■□□□□ 0.01
Ndufa11Q9D8B4 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ndufa11Q9D8B4 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Ndufa11Q9D8B4 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ndufa11Q9D8B4 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0.01
Ndufa11Q9D8B4 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Ndufa11Q9D8B4 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0.01
Ndufa11Q9D8B4 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Ndufa11Q9D8B4 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC15.08■□□□□ 0.01
Ndufa11Q9D8B4 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0.01
Ndufa11Q9D8B4 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC15.08■□□□□ 0.01
Ndufa11Q9D8B4 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC15.08■□□□□ 0
Ndufa11Q9D8B4 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Ndufa11Q9D8B4 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC15.08■□□□□ 0
Ndufa11Q9D8B4 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
Ndufa11Q9D8B4 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Ndufa11Q9D8B4 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Ndufa11Q9D8B4 Birc2-201ENSMUST00000054878 378 ntBASIC15.08■□□□□ 0
Ndufa11Q9D8B4 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Ndufa11Q9D8B4 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC15.08■□□□□ 0
Ndufa11Q9D8B4 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC15.08■□□□□ 0
Ndufa11Q9D8B4 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC15.08■□□□□ 0
Ndufa11Q9D8B4 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC15.08■□□□□ 0
Ndufa11Q9D8B4 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Ndufa11Q9D8B4 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
Ndufa11Q9D8B4 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
Ndufa11Q9D8B4 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Ndufa11Q9D8B4 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Ndufa11Q9D8B4 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Ndufa11Q9D8B4 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC15.07■□□□□ 0
Ndufa11Q9D8B4 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC15.07■□□□□ 0
Ndufa11Q9D8B4 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC15.07■□□□□ 0
Ndufa11Q9D8B4 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
Ndufa11Q9D8B4 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC15.07■□□□□ 0
Ndufa11Q9D8B4 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Ndufa11Q9D8B4 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC15.07■□□□□ 0
Ndufa11Q9D8B4 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
Ndufa11Q9D8B4 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
Ndufa11Q9D8B4 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Ndufa11Q9D8B4 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Ndufa11Q9D8B4 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Ndufa11Q9D8B4 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Ndufa11Q9D8B4 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
Ndufa11Q9D8B4 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC15.06■□□□□ 0
Ndufa11Q9D8B4 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Ndufa11Q9D8B4 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
Ndufa11Q9D8B4 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Ndufa11Q9D8B4 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Ndufa11Q9D8B4 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC15.06■□□□□ 0
Ndufa11Q9D8B4 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC15.06■□□□□ 0
Ndufa11Q9D8B4 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC15.06■□□□□ 0
Ndufa11Q9D8B4 Mir8098-201ENSMUST00000184011 137 ntBASIC15.06■□□□□ 0
Ndufa11Q9D8B4 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC15.06■□□□□ 0
Ndufa11Q9D8B4 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
Ndufa11Q9D8B4 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC15.06■□□□□ 0
Ndufa11Q9D8B4 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC15.06■□□□□ 0
Ndufa11Q9D8B4 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Ndufa11Q9D8B4 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Ndufa11Q9D8B4 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC15.06■□□□□ 0
Ndufa11Q9D8B4 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Ndufa11Q9D8B4 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC15.05■□□□□ 0
Ndufa11Q9D8B4 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ 0
Ndufa11Q9D8B4 Hsf1-204ENSMUST00000226872 2104 ntBASIC15.05■□□□□ 0
Ndufa11Q9D8B4 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Ndufa11Q9D8B4 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Ndufa11Q9D8B4 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Ndufa11Q9D8B4 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ 0
Ndufa11Q9D8B4 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC15.05■□□□□ 0
Ndufa11Q9D8B4 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ 0
Ndufa11Q9D8B4 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC15.05■□□□□ -0
Ndufa11Q9D8B4 Olfr129-201ENSMUST00000122318 993 ntBASIC15.05■□□□□ -0
Ndufa11Q9D8B4 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC15.05■□□□□ -0
Ndufa11Q9D8B4 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
Ndufa11Q9D8B4 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC15.05■□□□□ -0
Ndufa11Q9D8B4 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC15.05■□□□□ -0
Ndufa11Q9D8B4 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC15.05■□□□□ -0
Ndufa11Q9D8B4 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC15.05■□□□□ -0
Ndufa11Q9D8B4 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Ndufa11Q9D8B4 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Ndufa11Q9D8B4 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Ndufa11Q9D8B4 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
Ndufa11Q9D8B4 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Ndufa11Q9D8B4 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Ndufa11Q9D8B4 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC15.05■□□□□ -0
Ndufa11Q9D8B4 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Ndufa11Q9D8B4 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC15.04■□□□□ -0
Ndufa11Q9D8B4 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Ndufa11Q9D8B4 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC15.04■□□□□ -0
Ndufa11Q9D8B4 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC15.04■□□□□ -0
Ndufa11Q9D8B4 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Ndufa11Q9D8B4 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Ndufa11Q9D8B4 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC15.03■□□□□ -0
Ndufa11Q9D8B4 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC15.03■□□□□ -0
Ndufa11Q9D8B4 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ndufa11Q9D8B4 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC15.03■□□□□ -0
Retrieved 100 of 76,532 protein–RNA pairs in 20.2 ms