Protein–RNA interactions for Protein: Q9D7S1

Tmem54, Transmembrane protein 54, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tmem54Q9D7S1 Fcho2-208ENSMUST00000224992 2964 ntBASIC15.31■□□□□ 0.04
Tmem54Q9D7S1 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC15.31■□□□□ 0.04
Tmem54Q9D7S1 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC15.31■□□□□ 0.04
Tmem54Q9D7S1 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Tmem54Q9D7S1 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Tmem54Q9D7S1 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Tmem54Q9D7S1 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Tmem54Q9D7S1 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC15.3■□□□□ 0.04
Tmem54Q9D7S1 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Tmem54Q9D7S1 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC15.3■□□□□ 0.04
Tmem54Q9D7S1 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Tmem54Q9D7S1 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Tmem54Q9D7S1 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Tmem54Q9D7S1 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
Tmem54Q9D7S1 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Tmem54Q9D7S1 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Tmem54Q9D7S1 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Tmem54Q9D7S1 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
Tmem54Q9D7S1 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Tmem54Q9D7S1 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Tmem54Q9D7S1 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Tmem54Q9D7S1 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Tmem54Q9D7S1 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Tmem54Q9D7S1 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Tmem54Q9D7S1 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Tmem54Q9D7S1 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Tmem54Q9D7S1 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Tmem54Q9D7S1 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Tmem54Q9D7S1 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC15.29■□□□□ 0.04
Tmem54Q9D7S1 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC15.29■□□□□ 0.04
Tmem54Q9D7S1 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Tmem54Q9D7S1 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Tmem54Q9D7S1 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Tmem54Q9D7S1 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Tmem54Q9D7S1 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Tmem54Q9D7S1 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Tmem54Q9D7S1 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Tmem54Q9D7S1 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Tmem54Q9D7S1 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Tmem54Q9D7S1 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Tmem54Q9D7S1 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC15.28■□□□□ 0.04
Tmem54Q9D7S1 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC15.28■□□□□ 0.04
Tmem54Q9D7S1 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC15.28■□□□□ 0.04
Tmem54Q9D7S1 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Tmem54Q9D7S1 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC15.28■□□□□ 0.04
Tmem54Q9D7S1 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Tmem54Q9D7S1 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Tmem54Q9D7S1 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Tmem54Q9D7S1 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Tmem54Q9D7S1 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Tmem54Q9D7S1 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Tmem54Q9D7S1 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Tmem54Q9D7S1 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Tmem54Q9D7S1 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Tmem54Q9D7S1 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Tmem54Q9D7S1 Gm44832-201ENSMUST00000208849 2303 ntBASIC15.28■□□□□ 0.04
Tmem54Q9D7S1 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Tmem54Q9D7S1 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
Tmem54Q9D7S1 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
Tmem54Q9D7S1 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Tmem54Q9D7S1 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
Tmem54Q9D7S1 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC15.27■□□□□ 0.04
Tmem54Q9D7S1 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Tmem54Q9D7S1 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC15.27■□□□□ 0.04
Tmem54Q9D7S1 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Tmem54Q9D7S1 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC15.27■□□□□ 0.04
Tmem54Q9D7S1 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC15.27■□□□□ 0.04
Tmem54Q9D7S1 Mir5122-201ENSMUST00000175004 89 ntBASIC15.27■□□□□ 0.04
Tmem54Q9D7S1 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Tmem54Q9D7S1 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC15.27■□□□□ 0.04
Tmem54Q9D7S1 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC15.27■□□□□ 0.04
Tmem54Q9D7S1 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Tmem54Q9D7S1 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
Tmem54Q9D7S1 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Tmem54Q9D7S1 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Tmem54Q9D7S1 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Tmem54Q9D7S1 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC15.27■□□□□ 0.03
Tmem54Q9D7S1 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
Tmem54Q9D7S1 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Tmem54Q9D7S1 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Tmem54Q9D7S1 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Tmem54Q9D7S1 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Tmem54Q9D7S1 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC15.26■□□□□ 0.03
Tmem54Q9D7S1 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Tmem54Q9D7S1 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC15.26■□□□□ 0.03
Tmem54Q9D7S1 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Tmem54Q9D7S1 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Tmem54Q9D7S1 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Tmem54Q9D7S1 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Tmem54Q9D7S1 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC15.26■□□□□ 0.03
Tmem54Q9D7S1 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC15.26■□□□□ 0.03
Tmem54Q9D7S1 Gm24841-201ENSMUST00000158676 357 ntBASIC15.26■□□□□ 0.03
Tmem54Q9D7S1 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Tmem54Q9D7S1 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC15.26■□□□□ 0.03
Tmem54Q9D7S1 Timm23-208ENSMUST00000226683 750 ntBASIC15.26■□□□□ 0.03
Tmem54Q9D7S1 AC156016.1-201ENSMUST00000227190 1035 ntBASIC15.26■□□□□ 0.03
Tmem54Q9D7S1 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Tmem54Q9D7S1 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Tmem54Q9D7S1 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC15.26■□□□□ 0.03
Tmem54Q9D7S1 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 20.3 ms