Protein–RNA interactions for Protein: Q9D3I0

5530400C23Rik, RIKEN cDNA 5530400C23 gene, mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
5530400C23RikQ9D3I0 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
5530400C23RikQ9D3I0 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
5530400C23RikQ9D3I0 Gm13401-201ENSMUST00000117074 291 ntBASIC17.16■□□□□ 0.34
5530400C23RikQ9D3I0 Gm13168-201ENSMUST00000121771 632 ntBASIC17.16■□□□□ 0.34
5530400C23RikQ9D3I0 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
5530400C23RikQ9D3I0 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC17.16■□□□□ 0.34
5530400C23RikQ9D3I0 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
5530400C23RikQ9D3I0 Gm27011-201ENSMUST00000182352 972 ntBASIC17.16■□□□□ 0.34
5530400C23RikQ9D3I0 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC17.16■□□□□ 0.34
5530400C23RikQ9D3I0 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
5530400C23RikQ9D3I0 Spcs1-207ENSMUST00000228767 1008 ntBASIC17.16■□□□□ 0.34
5530400C23RikQ9D3I0 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC17.16■□□□□ 0.34
5530400C23RikQ9D3I0 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
5530400C23RikQ9D3I0 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
5530400C23RikQ9D3I0 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
5530400C23RikQ9D3I0 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC17.15■□□□□ 0.34
5530400C23RikQ9D3I0 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
5530400C23RikQ9D3I0 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
5530400C23RikQ9D3I0 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
5530400C23RikQ9D3I0 Gm11643-201ENSMUST00000119578 864 ntBASIC17.15■□□□□ 0.34
5530400C23RikQ9D3I0 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC17.15■□□□□ 0.34
5530400C23RikQ9D3I0 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
5530400C23RikQ9D3I0 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
5530400C23RikQ9D3I0 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC17.15■□□□□ 0.34
5530400C23RikQ9D3I0 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
5530400C23RikQ9D3I0 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
5530400C23RikQ9D3I0 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
5530400C23RikQ9D3I0 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
5530400C23RikQ9D3I0 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
5530400C23RikQ9D3I0 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
5530400C23RikQ9D3I0 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
5530400C23RikQ9D3I0 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.34
5530400C23RikQ9D3I0 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
5530400C23RikQ9D3I0 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
5530400C23RikQ9D3I0 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
5530400C23RikQ9D3I0 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC17.14■□□□□ 0.33
5530400C23RikQ9D3I0 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
5530400C23RikQ9D3I0 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
5530400C23RikQ9D3I0 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
5530400C23RikQ9D3I0 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC17.14■□□□□ 0.33
5530400C23RikQ9D3I0 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC17.14■□□□□ 0.33
5530400C23RikQ9D3I0 AC166341.7-201ENSMUST00000221698 126 ntBASIC17.14■□□□□ 0.33
5530400C23RikQ9D3I0 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
5530400C23RikQ9D3I0 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
5530400C23RikQ9D3I0 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
5530400C23RikQ9D3I0 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
5530400C23RikQ9D3I0 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
5530400C23RikQ9D3I0 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
5530400C23RikQ9D3I0 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
5530400C23RikQ9D3I0 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC17.14■□□□□ 0.33
5530400C23RikQ9D3I0 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
5530400C23RikQ9D3I0 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC17.13■□□□□ 0.33
5530400C23RikQ9D3I0 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
5530400C23RikQ9D3I0 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
5530400C23RikQ9D3I0 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
5530400C23RikQ9D3I0 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC17.13■□□□□ 0.33
5530400C23RikQ9D3I0 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
5530400C23RikQ9D3I0 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC17.13■□□□□ 0.33
5530400C23RikQ9D3I0 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
5530400C23RikQ9D3I0 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
5530400C23RikQ9D3I0 Gm6576-201ENSMUST00000169678 883 ntBASIC17.13■□□□□ 0.33
5530400C23RikQ9D3I0 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
5530400C23RikQ9D3I0 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
5530400C23RikQ9D3I0 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
5530400C23RikQ9D3I0 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
5530400C23RikQ9D3I0 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
5530400C23RikQ9D3I0 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
5530400C23RikQ9D3I0 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
5530400C23RikQ9D3I0 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
5530400C23RikQ9D3I0 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
5530400C23RikQ9D3I0 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
5530400C23RikQ9D3I0 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
5530400C23RikQ9D3I0 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
5530400C23RikQ9D3I0 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
5530400C23RikQ9D3I0 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
5530400C23RikQ9D3I0 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC17.12■□□□□ 0.33
5530400C23RikQ9D3I0 Gm15378-201ENSMUST00000121894 207 ntBASIC17.12■□□□□ 0.33
5530400C23RikQ9D3I0 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
5530400C23RikQ9D3I0 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
5530400C23RikQ9D3I0 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
5530400C23RikQ9D3I0 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
5530400C23RikQ9D3I0 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
5530400C23RikQ9D3I0 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
5530400C23RikQ9D3I0 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
5530400C23RikQ9D3I0 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
5530400C23RikQ9D3I0 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC17.12■□□□□ 0.33
5530400C23RikQ9D3I0 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
5530400C23RikQ9D3I0 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
5530400C23RikQ9D3I0 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
5530400C23RikQ9D3I0 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
5530400C23RikQ9D3I0 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
5530400C23RikQ9D3I0 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
5530400C23RikQ9D3I0 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
5530400C23RikQ9D3I0 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
5530400C23RikQ9D3I0 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC17.11■□□□□ 0.33
5530400C23RikQ9D3I0 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC17.11■□□□□ 0.33
5530400C23RikQ9D3I0 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
5530400C23RikQ9D3I0 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC17.11■□□□□ 0.33
5530400C23RikQ9D3I0 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
5530400C23RikQ9D3I0 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 34 ms