Protein–RNA interactions for Protein: Q9D2H5

Trim42, Tripartite motif-containing protein 42, mousemouse

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim42Q9D2H5 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trim42Q9D2H5 Gm37563-201ENSMUST00000192580 1513 ntBASIC17.49■□□□□ 0.39
Trim42Q9D2H5 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Trim42Q9D2H5 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC17.49■□□□□ 0.39
Trim42Q9D2H5 CT010467.1-202ENSMUST00000205406 714 ntBASIC17.49■□□□□ 0.39
Trim42Q9D2H5 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC17.49■□□□□ 0.39
Trim42Q9D2H5 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trim42Q9D2H5 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trim42Q9D2H5 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Trim42Q9D2H5 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trim42Q9D2H5 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trim42Q9D2H5 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trim42Q9D2H5 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trim42Q9D2H5 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trim42Q9D2H5 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
Trim42Q9D2H5 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trim42Q9D2H5 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC17.48■□□□□ 0.39
Trim42Q9D2H5 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trim42Q9D2H5 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trim42Q9D2H5 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trim42Q9D2H5 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Trim42Q9D2H5 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC17.48■□□□□ 0.39
Trim42Q9D2H5 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Trim42Q9D2H5 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trim42Q9D2H5 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trim42Q9D2H5 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trim42Q9D2H5 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trim42Q9D2H5 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Trim42Q9D2H5 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Trim42Q9D2H5 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC17.47■□□□□ 0.39
Trim42Q9D2H5 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trim42Q9D2H5 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Trim42Q9D2H5 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trim42Q9D2H5 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Trim42Q9D2H5 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
Trim42Q9D2H5 Gm40848-201ENSMUST00000221998 324 ntBASIC17.47■□□□□ 0.39
Trim42Q9D2H5 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Trim42Q9D2H5 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trim42Q9D2H5 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Trim42Q9D2H5 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trim42Q9D2H5 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trim42Q9D2H5 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Trim42Q9D2H5 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trim42Q9D2H5 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC17.47■□□□□ 0.39
Trim42Q9D2H5 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC17.46■□□□□ 0.39
Trim42Q9D2H5 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC17.46■□□□□ 0.39
Trim42Q9D2H5 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trim42Q9D2H5 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Trim42Q9D2H5 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trim42Q9D2H5 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC17.46■□□□□ 0.39
Trim42Q9D2H5 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC17.46■□□□□ 0.39
Trim42Q9D2H5 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Trim42Q9D2H5 Dancr-204ENSMUST00000132389 2347 ntBASIC17.46■□□□□ 0.39
Trim42Q9D2H5 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
Trim42Q9D2H5 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
Trim42Q9D2H5 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trim42Q9D2H5 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trim42Q9D2H5 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
Trim42Q9D2H5 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trim42Q9D2H5 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trim42Q9D2H5 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trim42Q9D2H5 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Trim42Q9D2H5 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trim42Q9D2H5 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.38
Trim42Q9D2H5 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trim42Q9D2H5 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC17.45■□□□□ 0.38
Trim42Q9D2H5 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trim42Q9D2H5 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trim42Q9D2H5 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
Trim42Q9D2H5 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trim42Q9D2H5 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Trim42Q9D2H5 Gm12821-201ENSMUST00000120022 600 ntBASIC17.45■□□□□ 0.38
Trim42Q9D2H5 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC17.45■□□□□ 0.38
Trim42Q9D2H5 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trim42Q9D2H5 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trim42Q9D2H5 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trim42Q9D2H5 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trim42Q9D2H5 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
Trim42Q9D2H5 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Trim42Q9D2H5 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trim42Q9D2H5 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trim42Q9D2H5 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trim42Q9D2H5 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trim42Q9D2H5 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trim42Q9D2H5 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC17.44■□□□□ 0.38
Trim42Q9D2H5 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trim42Q9D2H5 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trim42Q9D2H5 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC17.44■□□□□ 0.38
Trim42Q9D2H5 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Trim42Q9D2H5 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Trim42Q9D2H5 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Trim42Q9D2H5 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Trim42Q9D2H5 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trim42Q9D2H5 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC17.44■□□□□ 0.38
Trim42Q9D2H5 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trim42Q9D2H5 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trim42Q9D2H5 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC17.44■□□□□ 0.38
Trim42Q9D2H5 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Trim42Q9D2H5 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trim42Q9D2H5 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 37.4 ms