Protein–RNA interactions for Protein: Q99P47

Cntnap4, Contactin-associated protein-like 4, mousemouse

Predictions only

Length 1,310 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cntnap4Q99P47 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Cntnap4Q99P47 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Cntnap4Q99P47 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Cntnap4Q99P47 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC18.73■□□□□ 0.59
Cntnap4Q99P47 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Cntnap4Q99P47 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Cntnap4Q99P47 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Cntnap4Q99P47 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
Cntnap4Q99P47 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Cntnap4Q99P47 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Cntnap4Q99P47 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC18.73■□□□□ 0.59
Cntnap4Q99P47 Gm43353-201ENSMUST00000199224 1295 ntBASIC18.73■□□□□ 0.59
Cntnap4Q99P47 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Cntnap4Q99P47 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Cntnap4Q99P47 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC18.73■□□□□ 0.59
Cntnap4Q99P47 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Cntnap4Q99P47 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Cntnap4Q99P47 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
Cntnap4Q99P47 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
Cntnap4Q99P47 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Cntnap4Q99P47 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Cntnap4Q99P47 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Cntnap4Q99P47 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Cntnap4Q99P47 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
Cntnap4Q99P47 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Cntnap4Q99P47 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Cntnap4Q99P47 Gm9103-201ENSMUST00000119371 405 ntBASIC18.72■□□□□ 0.59
Cntnap4Q99P47 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Cntnap4Q99P47 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC18.72■□□□□ 0.59
Cntnap4Q99P47 AC159205.6-201ENSMUST00000224935 887 ntBASIC18.72■□□□□ 0.59
Cntnap4Q99P47 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Cntnap4Q99P47 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Cntnap4Q99P47 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Cntnap4Q99P47 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Cntnap4Q99P47 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Cntnap4Q99P47 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
Cntnap4Q99P47 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC18.71■□□□□ 0.59
Cntnap4Q99P47 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
Cntnap4Q99P47 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Cntnap4Q99P47 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Cntnap4Q99P47 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
Cntnap4Q99P47 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Cntnap4Q99P47 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC18.71■□□□□ 0.59
Cntnap4Q99P47 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Cntnap4Q99P47 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Cntnap4Q99P47 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC18.71■□□□□ 0.59
Cntnap4Q99P47 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Cntnap4Q99P47 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC18.71■□□□□ 0.59
Cntnap4Q99P47 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC18.71■□□□□ 0.59
Cntnap4Q99P47 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Cntnap4Q99P47 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
Cntnap4Q99P47 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Cntnap4Q99P47 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Cntnap4Q99P47 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
Cntnap4Q99P47 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
Cntnap4Q99P47 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Cntnap4Q99P47 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cntnap4Q99P47 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cntnap4Q99P47 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cntnap4Q99P47 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cntnap4Q99P47 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cntnap4Q99P47 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cntnap4Q99P47 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC18.7■□□□□ 0.58
Cntnap4Q99P47 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cntnap4Q99P47 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cntnap4Q99P47 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cntnap4Q99P47 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cntnap4Q99P47 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC18.7■□□□□ 0.58
Cntnap4Q99P47 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cntnap4Q99P47 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC18.69■□□□□ 0.58
Cntnap4Q99P47 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cntnap4Q99P47 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Cntnap4Q99P47 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Cntnap4Q99P47 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Cntnap4Q99P47 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
Cntnap4Q99P47 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cntnap4Q99P47 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Cntnap4Q99P47 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
Cntnap4Q99P47 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cntnap4Q99P47 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC18.69■□□□□ 0.58
Cntnap4Q99P47 AC159205.3-201ENSMUST00000224614 874 ntBASIC18.69■□□□□ 0.58
Cntnap4Q99P47 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cntnap4Q99P47 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cntnap4Q99P47 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cntnap4Q99P47 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Cntnap4Q99P47 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Cntnap4Q99P47 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Cntnap4Q99P47 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cntnap4Q99P47 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cntnap4Q99P47 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Cntnap4Q99P47 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cntnap4Q99P47 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cntnap4Q99P47 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC18.68■□□□□ 0.58
Cntnap4Q99P47 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Cntnap4Q99P47 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC18.68■□□□□ 0.58
Cntnap4Q99P47 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC18.68■□□□□ 0.58
Cntnap4Q99P47 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC18.68■□□□□ 0.58
Cntnap4Q99P47 Gm18959-201ENSMUST00000208954 655 ntBASIC18.68■□□□□ 0.58
Cntnap4Q99P47 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cntnap4Q99P47 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC18.68■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 9.7 ms