Protein–RNA interactions for Protein: Q99MS8

Tpgs1, Tubulin polyglutamylase complex subunit 1, mousemouse

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpgs1Q99MS8 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Tpgs1Q99MS8 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Tpgs1Q99MS8 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Tpgs1Q99MS8 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
Tpgs1Q99MS8 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Tpgs1Q99MS8 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
Tpgs1Q99MS8 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC18.2■□□□□ 0.5
Tpgs1Q99MS8 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC18.2■□□□□ 0.5
Tpgs1Q99MS8 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Tpgs1Q99MS8 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Tpgs1Q99MS8 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Tpgs1Q99MS8 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC18.2■□□□□ 0.5
Tpgs1Q99MS8 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC18.2■□□□□ 0.5
Tpgs1Q99MS8 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Tpgs1Q99MS8 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Tpgs1Q99MS8 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC18.2■□□□□ 0.5
Tpgs1Q99MS8 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Tpgs1Q99MS8 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Tpgs1Q99MS8 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Tpgs1Q99MS8 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Tpgs1Q99MS8 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
Tpgs1Q99MS8 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Tpgs1Q99MS8 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Tpgs1Q99MS8 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Tpgs1Q99MS8 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Tpgs1Q99MS8 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Tpgs1Q99MS8 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Tpgs1Q99MS8 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Tpgs1Q99MS8 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Tpgs1Q99MS8 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Tpgs1Q99MS8 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Tpgs1Q99MS8 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
Tpgs1Q99MS8 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Tpgs1Q99MS8 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
Tpgs1Q99MS8 Gm7638-201ENSMUST00000121348 967 ntBASIC18.19■□□□□ 0.5
Tpgs1Q99MS8 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC18.19■□□□□ 0.5
Tpgs1Q99MS8 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC18.19■□□□□ 0.5
Tpgs1Q99MS8 AC135963.1-201ENSMUST00000211640 717 ntBASIC18.19■□□□□ 0.5
Tpgs1Q99MS8 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Tpgs1Q99MS8 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC18.19■□□□□ 0.5
Tpgs1Q99MS8 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
Tpgs1Q99MS8 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Tpgs1Q99MS8 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Tpgs1Q99MS8 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Tpgs1Q99MS8 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Tpgs1Q99MS8 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Tpgs1Q99MS8 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC18.18■□□□□ 0.5
Tpgs1Q99MS8 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Tpgs1Q99MS8 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Tpgs1Q99MS8 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Tpgs1Q99MS8 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC18.18■□□□□ 0.5
Tpgs1Q99MS8 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC18.18■□□□□ 0.5
Tpgs1Q99MS8 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Tpgs1Q99MS8 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Tpgs1Q99MS8 Gm9731-201ENSMUST00000209480 747 ntBASIC18.18■□□□□ 0.5
Tpgs1Q99MS8 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Tpgs1Q99MS8 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Tpgs1Q99MS8 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC18.18■□□□□ 0.5
Tpgs1Q99MS8 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Tpgs1Q99MS8 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Tpgs1Q99MS8 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Tpgs1Q99MS8 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Tpgs1Q99MS8 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Tpgs1Q99MS8 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC18.18■□□□□ 0.5
Tpgs1Q99MS8 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
Tpgs1Q99MS8 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC18.17■□□□□ 0.5
Tpgs1Q99MS8 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC18.17■□□□□ 0.5
Tpgs1Q99MS8 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Tpgs1Q99MS8 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Tpgs1Q99MS8 Rarb-207ENSMUST00000225921 2756 ntBASIC18.17■□□□□ 0.5
Tpgs1Q99MS8 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Tpgs1Q99MS8 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC18.17■□□□□ 0.5
Tpgs1Q99MS8 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC18.17■□□□□ 0.5
Tpgs1Q99MS8 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Tpgs1Q99MS8 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC18.17■□□□□ 0.5
Tpgs1Q99MS8 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
Tpgs1Q99MS8 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Tpgs1Q99MS8 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Tpgs1Q99MS8 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC18.17■□□□□ 0.5
Tpgs1Q99MS8 Il3ra-202ENSMUST00000223589 738 ntBASIC18.17■□□□□ 0.5
Tpgs1Q99MS8 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Tpgs1Q99MS8 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Tpgs1Q99MS8 Gm5417-201ENSMUST00000079706 384 ntBASIC18.17■□□□□ 0.5
Tpgs1Q99MS8 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Tpgs1Q99MS8 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Tpgs1Q99MS8 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Tpgs1Q99MS8 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Tpgs1Q99MS8 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Tpgs1Q99MS8 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Tpgs1Q99MS8 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC18.16■□□□□ 0.5
Tpgs1Q99MS8 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Tpgs1Q99MS8 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC18.16■□□□□ 0.5
Tpgs1Q99MS8 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Tpgs1Q99MS8 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Tpgs1Q99MS8 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC18.16■□□□□ 0.5
Tpgs1Q99MS8 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC18.16■□□□□ 0.5
Tpgs1Q99MS8 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Tpgs1Q99MS8 Gm37194-201ENSMUST00000193092 3031 ntBASIC18.15■□□□□ 0.5
Tpgs1Q99MS8 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC18.15■□□□□ 0.5
Tpgs1Q99MS8 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 21.5 ms