Protein–RNA interactions for Protein: Q99K46

Usp11, Ubiquitin carboxyl-terminal hydrolase 11, mousemouse

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp11Q99K46 Gm12896-201ENSMUST00000118430 226 ntBASIC18.42■□□□□ 0.54
Usp11Q99K46 Spcs1-207ENSMUST00000228767 1008 ntBASIC18.42■□□□□ 0.54
Usp11Q99K46 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Usp11Q99K46 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Usp11Q99K46 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Usp11Q99K46 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Usp11Q99K46 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC18.42■□□□□ 0.54
Usp11Q99K46 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Usp11Q99K46 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Usp11Q99K46 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Usp11Q99K46 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC18.42■□□□□ 0.54
Usp11Q99K46 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Usp11Q99K46 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
Usp11Q99K46 Dio3-201ENSMUST00000097228 1449 ntBASIC18.41■□□□□ 0.54
Usp11Q99K46 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Usp11Q99K46 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Usp11Q99K46 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
Usp11Q99K46 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
Usp11Q99K46 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC18.41■□□□□ 0.54
Usp11Q99K46 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC18.41■□□□□ 0.54
Usp11Q99K46 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Usp11Q99K46 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC18.41■□□□□ 0.54
Usp11Q99K46 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Usp11Q99K46 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Usp11Q99K46 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Usp11Q99K46 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Usp11Q99K46 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Usp11Q99K46 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Usp11Q99K46 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Usp11Q99K46 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
Usp11Q99K46 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
Usp11Q99K46 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
Usp11Q99K46 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
Usp11Q99K46 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Usp11Q99K46 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Usp11Q99K46 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Usp11Q99K46 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
Usp11Q99K46 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
Usp11Q99K46 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Usp11Q99K46 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Usp11Q99K46 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Usp11Q99K46 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Usp11Q99K46 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC18.4■□□□□ 0.54
Usp11Q99K46 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Usp11Q99K46 Wnt10b-205ENSMUST00000226846 1204 ntBASIC18.4■□□□□ 0.54
Usp11Q99K46 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Usp11Q99K46 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Usp11Q99K46 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
Usp11Q99K46 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Usp11Q99K46 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Usp11Q99K46 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Usp11Q99K46 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Usp11Q99K46 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
Usp11Q99K46 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Usp11Q99K46 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
Usp11Q99K46 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Usp11Q99K46 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Usp11Q99K46 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Usp11Q99K46 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Usp11Q99K46 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC18.39■□□□□ 0.53
Usp11Q99K46 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
Usp11Q99K46 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Usp11Q99K46 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Usp11Q99K46 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Usp11Q99K46 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Usp11Q99K46 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Usp11Q99K46 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Usp11Q99K46 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Usp11Q99K46 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Usp11Q99K46 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Usp11Q99K46 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Usp11Q99K46 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Usp11Q99K46 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Usp11Q99K46 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Usp11Q99K46 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC18.38■□□□□ 0.53
Usp11Q99K46 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
Usp11Q99K46 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Usp11Q99K46 Gm10653-202ENSMUST00000139570 835 ntBASIC18.38■□□□□ 0.53
Usp11Q99K46 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Usp11Q99K46 Gm37856-201ENSMUST00000191634 999 ntBASIC18.38■□□□□ 0.53
Usp11Q99K46 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Usp11Q99K46 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Usp11Q99K46 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Usp11Q99K46 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC18.38■□□□□ 0.53
Usp11Q99K46 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC18.38■□□□□ 0.53
Usp11Q99K46 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC18.38■□□□□ 0.53
Usp11Q99K46 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC18.38■□□□□ 0.53
Usp11Q99K46 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Usp11Q99K46 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Usp11Q99K46 Gm15635-204ENSMUST00000208024 2539 ntBASIC18.38■□□□□ 0.53
Usp11Q99K46 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Usp11Q99K46 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Usp11Q99K46 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC18.37■□□□□ 0.53
Usp11Q99K46 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC18.37■□□□□ 0.53
Usp11Q99K46 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Usp11Q99K46 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Usp11Q99K46 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Usp11Q99K46 Gm15847-201ENSMUST00000121417 1065 ntBASIC18.37■□□□□ 0.53
Usp11Q99K46 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Usp11Q99K46 Gm27011-201ENSMUST00000182352 972 ntBASIC18.37■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 18.9 ms