Protein–RNA interactions for Protein: Q99JR8

Smarcd2, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 2, mousemouse

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd2Q99JR8 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Smarcd2Q99JR8 Gm38342-201ENSMUST00000195710 2980 ntBASIC17.67■□□□□ 0.42
Smarcd2Q99JR8 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC17.67■□□□□ 0.42
Smarcd2Q99JR8 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Smarcd2Q99JR8 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Smarcd2Q99JR8 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Smarcd2Q99JR8 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Smarcd2Q99JR8 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Smarcd2Q99JR8 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC17.66■□□□□ 0.42
Smarcd2Q99JR8 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Smarcd2Q99JR8 AC130713.1-201ENSMUST00000228853 1096 ntBASIC17.66■□□□□ 0.42
Smarcd2Q99JR8 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Smarcd2Q99JR8 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Smarcd2Q99JR8 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Smarcd2Q99JR8 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Smarcd2Q99JR8 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Smarcd2Q99JR8 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Smarcd2Q99JR8 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC17.66■□□□□ 0.42
Smarcd2Q99JR8 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Smarcd2Q99JR8 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC17.65■□□□□ 0.42
Smarcd2Q99JR8 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Smarcd2Q99JR8 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Smarcd2Q99JR8 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC17.65■□□□□ 0.42
Smarcd2Q99JR8 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Smarcd2Q99JR8 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Smarcd2Q99JR8 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Smarcd2Q99JR8 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC17.65■□□□□ 0.42
Smarcd2Q99JR8 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Smarcd2Q99JR8 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Smarcd2Q99JR8 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Smarcd2Q99JR8 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Smarcd2Q99JR8 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Smarcd2Q99JR8 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Smarcd2Q99JR8 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Smarcd2Q99JR8 Gm6627-201ENSMUST00000218299 2386 ntBASIC17.65■□□□□ 0.42
Smarcd2Q99JR8 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Smarcd2Q99JR8 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
Smarcd2Q99JR8 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Smarcd2Q99JR8 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.42
Smarcd2Q99JR8 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Smarcd2Q99JR8 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
Smarcd2Q99JR8 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
Smarcd2Q99JR8 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC17.64■□□□□ 0.41
Smarcd2Q99JR8 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Smarcd2Q99JR8 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Smarcd2Q99JR8 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Smarcd2Q99JR8 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Smarcd2Q99JR8 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Smarcd2Q99JR8 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Smarcd2Q99JR8 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Smarcd2Q99JR8 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Smarcd2Q99JR8 Gm11950-201ENSMUST00000121615 838 ntBASIC17.64■□□□□ 0.41
Smarcd2Q99JR8 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC17.64■□□□□ 0.41
Smarcd2Q99JR8 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
Smarcd2Q99JR8 Gm3272-201ENSMUST00000181181 1229 ntBASIC17.64■□□□□ 0.41
Smarcd2Q99JR8 Gm28033-201ENSMUST00000184224 96 ntBASIC17.64■□□□□ 0.41
Smarcd2Q99JR8 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC17.64■□□□□ 0.41
Smarcd2Q99JR8 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC17.64■□□□□ 0.41
Smarcd2Q99JR8 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Smarcd2Q99JR8 Gm10566-201ENSMUST00000086739 996 ntBASIC17.64■□□□□ 0.41
Smarcd2Q99JR8 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Smarcd2Q99JR8 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Smarcd2Q99JR8 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Smarcd2Q99JR8 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Smarcd2Q99JR8 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Smarcd2Q99JR8 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Smarcd2Q99JR8 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Smarcd2Q99JR8 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Smarcd2Q99JR8 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
Smarcd2Q99JR8 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Smarcd2Q99JR8 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Smarcd2Q99JR8 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Smarcd2Q99JR8 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Smarcd2Q99JR8 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Smarcd2Q99JR8 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Smarcd2Q99JR8 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Smarcd2Q99JR8 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Smarcd2Q99JR8 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Smarcd2Q99JR8 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Smarcd2Q99JR8 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Smarcd2Q99JR8 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Smarcd2Q99JR8 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC17.63■□□□□ 0.41
Smarcd2Q99JR8 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Smarcd2Q99JR8 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC17.62■□□□□ 0.41
Smarcd2Q99JR8 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Smarcd2Q99JR8 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Smarcd2Q99JR8 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Smarcd2Q99JR8 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Smarcd2Q99JR8 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC17.62■□□□□ 0.41
Smarcd2Q99JR8 Gm18669-201ENSMUST00000216049 778 ntBASIC17.62■□□□□ 0.41
Smarcd2Q99JR8 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Smarcd2Q99JR8 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Smarcd2Q99JR8 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Smarcd2Q99JR8 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Smarcd2Q99JR8 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC17.62■□□□□ 0.41
Smarcd2Q99JR8 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Smarcd2Q99JR8 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Smarcd2Q99JR8 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Smarcd2Q99JR8 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Smarcd2Q99JR8 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 38.2 ms