Protein–RNA interactions for Protein: Q91Y00

Pcdhb2, Protocadherin beta 2, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb2Q91Y00 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Pcdhb2Q91Y00 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Pcdhb2Q91Y00 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.57
Pcdhb2Q91Y00 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Pcdhb2Q91Y00 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
Pcdhb2Q91Y00 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Pcdhb2Q91Y00 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Pcdhb2Q91Y00 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC18.58■□□□□ 0.56
Pcdhb2Q91Y00 Mir5122-201ENSMUST00000175004 89 ntBASIC18.58■□□□□ 0.56
Pcdhb2Q91Y00 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Pcdhb2Q91Y00 Gm4974-201ENSMUST00000209974 875 ntBASIC18.58■□□□□ 0.56
Pcdhb2Q91Y00 Timm23-208ENSMUST00000226683 750 ntBASIC18.58■□□□□ 0.56
Pcdhb2Q91Y00 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Pcdhb2Q91Y00 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Pcdhb2Q91Y00 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Pcdhb2Q91Y00 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
Pcdhb2Q91Y00 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Pcdhb2Q91Y00 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
Pcdhb2Q91Y00 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC18.58■□□□□ 0.56
Pcdhb2Q91Y00 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Pcdhb2Q91Y00 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Pcdhb2Q91Y00 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Pcdhb2Q91Y00 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
Pcdhb2Q91Y00 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Pcdhb2Q91Y00 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Pcdhb2Q91Y00 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
Pcdhb2Q91Y00 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Pcdhb2Q91Y00 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Pcdhb2Q91Y00 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Pcdhb2Q91Y00 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC18.57■□□□□ 0.56
Pcdhb2Q91Y00 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC18.57■□□□□ 0.56
Pcdhb2Q91Y00 Gm37055-201ENSMUST00000191866 133 ntBASIC18.57■□□□□ 0.56
Pcdhb2Q91Y00 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC18.57■□□□□ 0.56
Pcdhb2Q91Y00 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC18.57■□□□□ 0.56
Pcdhb2Q91Y00 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Pcdhb2Q91Y00 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Pcdhb2Q91Y00 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
Pcdhb2Q91Y00 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
Pcdhb2Q91Y00 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Pcdhb2Q91Y00 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC18.57■□□□□ 0.56
Pcdhb2Q91Y00 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Pcdhb2Q91Y00 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
Pcdhb2Q91Y00 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC18.57■□□□□ 0.56
Pcdhb2Q91Y00 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Pcdhb2Q91Y00 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Pcdhb2Q91Y00 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Pcdhb2Q91Y00 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Pcdhb2Q91Y00 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Pcdhb2Q91Y00 Gm13401-201ENSMUST00000117074 291 ntBASIC18.56■□□□□ 0.56
Pcdhb2Q91Y00 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Pcdhb2Q91Y00 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Pcdhb2Q91Y00 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Pcdhb2Q91Y00 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Pcdhb2Q91Y00 Gm45141-201ENSMUST00000206502 1888 ntBASIC18.56■□□□□ 0.56
Pcdhb2Q91Y00 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC18.56■□□□□ 0.56
Pcdhb2Q91Y00 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Pcdhb2Q91Y00 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Pcdhb2Q91Y00 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Pcdhb2Q91Y00 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Pcdhb2Q91Y00 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Pcdhb2Q91Y00 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
Pcdhb2Q91Y00 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Pcdhb2Q91Y00 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Pcdhb2Q91Y00 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
Pcdhb2Q91Y00 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC18.55■□□□□ 0.56
Pcdhb2Q91Y00 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC18.55■□□□□ 0.56
Pcdhb2Q91Y00 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
Pcdhb2Q91Y00 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
Pcdhb2Q91Y00 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC18.55■□□□□ 0.56
Pcdhb2Q91Y00 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Pcdhb2Q91Y00 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Pcdhb2Q91Y00 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Pcdhb2Q91Y00 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Pcdhb2Q91Y00 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Pcdhb2Q91Y00 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Pcdhb2Q91Y00 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
Pcdhb2Q91Y00 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Pcdhb2Q91Y00 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Pcdhb2Q91Y00 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Pcdhb2Q91Y00 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Pcdhb2Q91Y00 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Pcdhb2Q91Y00 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Pcdhb2Q91Y00 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC18.54■□□□□ 0.56
Pcdhb2Q91Y00 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Pcdhb2Q91Y00 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
Pcdhb2Q91Y00 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC18.54■□□□□ 0.56
Pcdhb2Q91Y00 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Pcdhb2Q91Y00 Arhgef4-208ENSMUST00000211073 171 ntBASIC18.54■□□□□ 0.56
Pcdhb2Q91Y00 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Pcdhb2Q91Y00 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Pcdhb2Q91Y00 Gm5417-201ENSMUST00000079706 384 ntBASIC18.54■□□□□ 0.56
Pcdhb2Q91Y00 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Pcdhb2Q91Y00 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Pcdhb2Q91Y00 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Pcdhb2Q91Y00 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Pcdhb2Q91Y00 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Pcdhb2Q91Y00 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Pcdhb2Q91Y00 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Pcdhb2Q91Y00 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC18.53■□□□□ 0.56
Pcdhb2Q91Y00 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC18.53■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms