Protein–RNA interactions for Protein: Q91XX6

Pcdhgb4, Protocadherin gamma B4, mousemouse

Predictions only

Length 912 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgb4Q91XX6 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Pcdhgb4Q91XX6 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Pcdhgb4Q91XX6 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Pcdhgb4Q91XX6 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC18.5■□□□□ 0.55
Pcdhgb4Q91XX6 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Pcdhgb4Q91XX6 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Pcdhgb4Q91XX6 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Pcdhgb4Q91XX6 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Pcdhgb4Q91XX6 Gm45560-201ENSMUST00000211492 1472 ntBASIC18.5■□□□□ 0.55
Pcdhgb4Q91XX6 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Pcdhgb4Q91XX6 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC18.5■□□□□ 0.55
Pcdhgb4Q91XX6 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC18.5■□□□□ 0.55
Pcdhgb4Q91XX6 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Pcdhgb4Q91XX6 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC18.5■□□□□ 0.55
Pcdhgb4Q91XX6 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Pcdhgb4Q91XX6 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Pcdhgb4Q91XX6 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Pcdhgb4Q91XX6 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdhgb4Q91XX6 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdhgb4Q91XX6 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Pcdhgb4Q91XX6 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdhgb4Q91XX6 Mir8112-201ENSMUST00000184382 131 ntBASIC18.49■□□□□ 0.55
Pcdhgb4Q91XX6 Gm10138-203ENSMUST00000206952 366 ntBASIC18.49■□□□□ 0.55
Pcdhgb4Q91XX6 Gm20049-201ENSMUST00000219950 730 ntBASIC18.49■□□□□ 0.55
Pcdhgb4Q91XX6 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdhgb4Q91XX6 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdhgb4Q91XX6 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdhgb4Q91XX6 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Pcdhgb4Q91XX6 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdhgb4Q91XX6 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdhgb4Q91XX6 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC18.49■□□□□ 0.55
Pcdhgb4Q91XX6 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdhgb4Q91XX6 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdhgb4Q91XX6 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdhgb4Q91XX6 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdhgb4Q91XX6 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdhgb4Q91XX6 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
Pcdhgb4Q91XX6 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdhgb4Q91XX6 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdhgb4Q91XX6 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC18.49■□□□□ 0.55
Pcdhgb4Q91XX6 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdhgb4Q91XX6 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Pcdhgb4Q91XX6 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Pcdhgb4Q91XX6 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Pcdhgb4Q91XX6 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Pcdhgb4Q91XX6 Gm15375-201ENSMUST00000119510 849 ntBASIC18.48■□□□□ 0.55
Pcdhgb4Q91XX6 Gm12441-201ENSMUST00000121806 588 ntBASIC18.48■□□□□ 0.55
Pcdhgb4Q91XX6 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
Pcdhgb4Q91XX6 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Pcdhgb4Q91XX6 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Pcdhgb4Q91XX6 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
Pcdhgb4Q91XX6 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC18.48■□□□□ 0.55
Pcdhgb4Q91XX6 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC18.48■□□□□ 0.55
Pcdhgb4Q91XX6 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC18.48■□□□□ 0.55
Pcdhgb4Q91XX6 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Pcdhgb4Q91XX6 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Pcdhgb4Q91XX6 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
Pcdhgb4Q91XX6 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Pcdhgb4Q91XX6 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Pcdhgb4Q91XX6 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
Pcdhgb4Q91XX6 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Pcdhgb4Q91XX6 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Pcdhgb4Q91XX6 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
Pcdhgb4Q91XX6 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Pcdhgb4Q91XX6 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
Pcdhgb4Q91XX6 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
Pcdhgb4Q91XX6 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Pcdhgb4Q91XX6 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Pcdhgb4Q91XX6 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC18.47■□□□□ 0.55
Pcdhgb4Q91XX6 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Pcdhgb4Q91XX6 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Pcdhgb4Q91XX6 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Pcdhgb4Q91XX6 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Pcdhgb4Q91XX6 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Pcdhgb4Q91XX6 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Pcdhgb4Q91XX6 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC18.47■□□□□ 0.55
Pcdhgb4Q91XX6 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Pcdhgb4Q91XX6 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Pcdhgb4Q91XX6 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Pcdhgb4Q91XX6 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Pcdhgb4Q91XX6 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Pcdhgb4Q91XX6 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Pcdhgb4Q91XX6 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
Pcdhgb4Q91XX6 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Pcdhgb4Q91XX6 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC18.46■□□□□ 0.55
Pcdhgb4Q91XX6 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Pcdhgb4Q91XX6 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
Pcdhgb4Q91XX6 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
Pcdhgb4Q91XX6 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
Pcdhgb4Q91XX6 Gm10418-201ENSMUST00000100943 576 ntBASIC18.46■□□□□ 0.55
Pcdhgb4Q91XX6 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC18.46■□□□□ 0.55
Pcdhgb4Q91XX6 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Pcdhgb4Q91XX6 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Pcdhgb4Q91XX6 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Pcdhgb4Q91XX6 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Pcdhgb4Q91XX6 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
Pcdhgb4Q91XX6 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Pcdhgb4Q91XX6 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
Pcdhgb4Q91XX6 Gm10461-201ENSMUST00000202073 4786 ntBASIC18.45■□□□□ 0.54
Pcdhgb4Q91XX6 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 23 ms