Protein–RNA interactions for Protein: Q91V10

Vsx1, Visual system homeobox 1, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vsx1Q91V10 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC17.27■□□□□ 0.36
Vsx1Q91V10 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
Vsx1Q91V10 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Vsx1Q91V10 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Vsx1Q91V10 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
Vsx1Q91V10 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC17.27■□□□□ 0.36
Vsx1Q91V10 Gm7370-201ENSMUST00000219471 767 ntBASIC17.27■□□□□ 0.36
Vsx1Q91V10 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Vsx1Q91V10 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Vsx1Q91V10 Gm44832-201ENSMUST00000208849 2303 ntBASIC17.27■□□□□ 0.35
Vsx1Q91V10 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC17.27■□□□□ 0.35
Vsx1Q91V10 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Vsx1Q91V10 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC17.27■□□□□ 0.35
Vsx1Q91V10 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Vsx1Q91V10 Dmtn-210ENSMUST00000228824 2377 ntBASIC17.26■□□□□ 0.35
Vsx1Q91V10 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Vsx1Q91V10 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Vsx1Q91V10 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Vsx1Q91V10 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Vsx1Q91V10 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC17.26■□□□□ 0.35
Vsx1Q91V10 Gm9013-201ENSMUST00000132939 882 ntBASIC17.26■□□□□ 0.35
Vsx1Q91V10 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Vsx1Q91V10 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Vsx1Q91V10 Gm27389-201ENSMUST00000183622 195 ntBASIC17.26■□□□□ 0.35
Vsx1Q91V10 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC17.26■□□□□ 0.35
Vsx1Q91V10 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC17.26■□□□□ 0.35
Vsx1Q91V10 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Vsx1Q91V10 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Vsx1Q91V10 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Vsx1Q91V10 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Vsx1Q91V10 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Vsx1Q91V10 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Vsx1Q91V10 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Vsx1Q91V10 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Vsx1Q91V10 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Vsx1Q91V10 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Vsx1Q91V10 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Vsx1Q91V10 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Vsx1Q91V10 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Vsx1Q91V10 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC17.25■□□□□ 0.35
Vsx1Q91V10 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Vsx1Q91V10 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC17.25■□□□□ 0.35
Vsx1Q91V10 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC17.25■□□□□ 0.35
Vsx1Q91V10 Gm7791-201ENSMUST00000219066 539 ntBASIC17.25■□□□□ 0.35
Vsx1Q91V10 Mzt1-203ENSMUST00000227948 952 ntBASIC17.25■□□□□ 0.35
Vsx1Q91V10 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Vsx1Q91V10 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Vsx1Q91V10 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Vsx1Q91V10 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Vsx1Q91V10 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Vsx1Q91V10 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Vsx1Q91V10 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Vsx1Q91V10 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Vsx1Q91V10 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Vsx1Q91V10 Gm7856-201ENSMUST00000117514 1493 ntBASIC17.24■□□□□ 0.35
Vsx1Q91V10 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC17.24■□□□□ 0.35
Vsx1Q91V10 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Vsx1Q91V10 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Vsx1Q91V10 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Vsx1Q91V10 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Vsx1Q91V10 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Vsx1Q91V10 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Vsx1Q91V10 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Vsx1Q91V10 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC17.24■□□□□ 0.35
Vsx1Q91V10 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Vsx1Q91V10 Gm42900-201ENSMUST00000197184 2167 ntBASIC17.24■□□□□ 0.35
Vsx1Q91V10 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Vsx1Q91V10 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC17.24■□□□□ 0.35
Vsx1Q91V10 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Vsx1Q91V10 Gm4974-201ENSMUST00000209974 875 ntBASIC17.24■□□□□ 0.35
Vsx1Q91V10 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Vsx1Q91V10 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Vsx1Q91V10 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Vsx1Q91V10 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Vsx1Q91V10 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC17.24■□□□□ 0.35
Vsx1Q91V10 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Vsx1Q91V10 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Vsx1Q91V10 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC17.24■□□□□ 0.35
Vsx1Q91V10 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Vsx1Q91V10 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Vsx1Q91V10 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Vsx1Q91V10 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Vsx1Q91V10 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Vsx1Q91V10 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Vsx1Q91V10 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Vsx1Q91V10 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Vsx1Q91V10 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Vsx1Q91V10 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Vsx1Q91V10 Gm13474-201ENSMUST00000122466 815 ntBASIC17.23■□□□□ 0.35
Vsx1Q91V10 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Vsx1Q91V10 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC17.23■□□□□ 0.35
Vsx1Q91V10 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Vsx1Q91V10 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC17.23■□□□□ 0.35
Vsx1Q91V10 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Vsx1Q91V10 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Vsx1Q91V10 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC17.23■□□□□ 0.35
Vsx1Q91V10 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Vsx1Q91V10 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Vsx1Q91V10 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Vsx1Q91V10 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 14.7 ms