Protein–RNA interactions for Protein: Q8VIK1

Snrnp25, U11/U12 small nuclear ribonucleoprotein 25 kDa protein, mousemouse

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snrnp25Q8VIK1 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Snrnp25Q8VIK1 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Snrnp25Q8VIK1 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Snrnp25Q8VIK1 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Snrnp25Q8VIK1 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
Snrnp25Q8VIK1 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Snrnp25Q8VIK1 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Snrnp25Q8VIK1 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Snrnp25Q8VIK1 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC18.32■□□□□ 0.52
Snrnp25Q8VIK1 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Snrnp25Q8VIK1 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC18.32■□□□□ 0.52
Snrnp25Q8VIK1 Gm24841-201ENSMUST00000158676 357 ntBASIC18.32■□□□□ 0.52
Snrnp25Q8VIK1 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC18.32■□□□□ 0.52
Snrnp25Q8VIK1 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Snrnp25Q8VIK1 Timm23-208ENSMUST00000226683 750 ntBASIC18.32■□□□□ 0.52
Snrnp25Q8VIK1 Otx2os1-204ENSMUST00000227221 751 ntBASIC18.32■□□□□ 0.52
Snrnp25Q8VIK1 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Snrnp25Q8VIK1 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC18.32■□□□□ 0.52
Snrnp25Q8VIK1 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
Snrnp25Q8VIK1 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Snrnp25Q8VIK1 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Snrnp25Q8VIK1 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC18.32■□□□□ 0.52
Snrnp25Q8VIK1 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Snrnp25Q8VIK1 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Snrnp25Q8VIK1 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC18.32■□□□□ 0.52
Snrnp25Q8VIK1 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Snrnp25Q8VIK1 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Snrnp25Q8VIK1 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Snrnp25Q8VIK1 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Snrnp25Q8VIK1 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Snrnp25Q8VIK1 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC18.31■□□□□ 0.52
Snrnp25Q8VIK1 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC18.31■□□□□ 0.52
Snrnp25Q8VIK1 Gm8969-201ENSMUST00000199694 526 ntBASIC18.31■□□□□ 0.52
Snrnp25Q8VIK1 Arhgef4-208ENSMUST00000211073 171 ntBASIC18.31■□□□□ 0.52
Snrnp25Q8VIK1 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Snrnp25Q8VIK1 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Snrnp25Q8VIK1 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Snrnp25Q8VIK1 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Snrnp25Q8VIK1 AC125311.2-201ENSMUST00000227477 1940 ntBASIC18.31■□□□□ 0.52
Snrnp25Q8VIK1 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Snrnp25Q8VIK1 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Snrnp25Q8VIK1 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC18.31■□□□□ 0.52
Snrnp25Q8VIK1 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Snrnp25Q8VIK1 Gm37811-201ENSMUST00000192416 2601 ntBASIC18.3■□□□□ 0.52
Snrnp25Q8VIK1 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Snrnp25Q8VIK1 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Snrnp25Q8VIK1 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Snrnp25Q8VIK1 Gm9484-201ENSMUST00000195892 1159 ntBASIC18.3■□□□□ 0.52
Snrnp25Q8VIK1 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Snrnp25Q8VIK1 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Snrnp25Q8VIK1 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Snrnp25Q8VIK1 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Snrnp25Q8VIK1 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Snrnp25Q8VIK1 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Snrnp25Q8VIK1 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Snrnp25Q8VIK1 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC18.3■□□□□ 0.52
Snrnp25Q8VIK1 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC18.3■□□□□ 0.52
Snrnp25Q8VIK1 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Snrnp25Q8VIK1 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Snrnp25Q8VIK1 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Snrnp25Q8VIK1 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC18.3■□□□□ 0.52
Snrnp25Q8VIK1 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Snrnp25Q8VIK1 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Snrnp25Q8VIK1 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Snrnp25Q8VIK1 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
Snrnp25Q8VIK1 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Snrnp25Q8VIK1 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Snrnp25Q8VIK1 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Snrnp25Q8VIK1 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
Snrnp25Q8VIK1 Gm37055-201ENSMUST00000191866 133 ntBASIC18.29■□□□□ 0.52
Snrnp25Q8VIK1 Gm21814-202ENSMUST00000203277 873 ntBASIC18.29■□□□□ 0.52
Snrnp25Q8VIK1 Odf3b-204ENSMUST00000227834 930 ntBASIC18.29■□□□□ 0.52
Snrnp25Q8VIK1 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Snrnp25Q8VIK1 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC18.29■□□□□ 0.52
Snrnp25Q8VIK1 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Snrnp25Q8VIK1 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Snrnp25Q8VIK1 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Snrnp25Q8VIK1 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Snrnp25Q8VIK1 Gm45606-201ENSMUST00000209836 2795 ntBASIC18.28■□□□□ 0.52
Snrnp25Q8VIK1 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Snrnp25Q8VIK1 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Snrnp25Q8VIK1 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
Snrnp25Q8VIK1 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Snrnp25Q8VIK1 Gm3375-201ENSMUST00000203929 796 ntBASIC18.28■□□□□ 0.52
Snrnp25Q8VIK1 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC18.28■□□□□ 0.52
Snrnp25Q8VIK1 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC18.28■□□□□ 0.52
Snrnp25Q8VIK1 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Snrnp25Q8VIK1 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Snrnp25Q8VIK1 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
Snrnp25Q8VIK1 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
Snrnp25Q8VIK1 Gm19721-201ENSMUST00000195284 1764 ntBASIC18.27■□□□□ 0.52
Snrnp25Q8VIK1 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC18.27■□□□□ 0.52
Snrnp25Q8VIK1 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Snrnp25Q8VIK1 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Snrnp25Q8VIK1 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Snrnp25Q8VIK1 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Snrnp25Q8VIK1 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
Snrnp25Q8VIK1 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC18.27■□□□□ 0.52
Snrnp25Q8VIK1 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC18.27■□□□□ 0.51
Snrnp25Q8VIK1 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms