Protein–RNA interactions for Protein: Q8VHY0

Cspg4, Chondroitin sulfate proteoglycan 4, mousemouse

Predictions only

Length 2,327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cspg4Q8VHY0 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cspg4Q8VHY0 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cspg4Q8VHY0 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Cspg4Q8VHY0 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC15□□□□□ -0.01
Cspg4Q8VHY0 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
Cspg4Q8VHY0 Gm2213-201ENSMUST00000197485 688 ntBASIC15□□□□□ -0.01
Cspg4Q8VHY0 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC15□□□□□ -0.01
Cspg4Q8VHY0 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Cspg4Q8VHY0 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Cspg4Q8VHY0 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC15□□□□□ -0.01
Cspg4Q8VHY0 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Cspg4Q8VHY0 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Cspg4Q8VHY0 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Cspg4Q8VHY0 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Cspg4Q8VHY0 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Cspg4Q8VHY0 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Cspg4Q8VHY0 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Cspg4Q8VHY0 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Cspg4Q8VHY0 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
Cspg4Q8VHY0 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC15□□□□□ -0.01
Cspg4Q8VHY0 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC15□□□□□ -0.01
Cspg4Q8VHY0 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC15□□□□□ -0.01
Cspg4Q8VHY0 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC15□□□□□ -0.01
Cspg4Q8VHY0 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC15□□□□□ -0.01
Cspg4Q8VHY0 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Cspg4Q8VHY0 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Cspg4Q8VHY0 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Cspg4Q8VHY0 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Cspg4Q8VHY0 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Cspg4Q8VHY0 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cspg4Q8VHY0 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Cspg4Q8VHY0 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Cspg4Q8VHY0 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC14.99□□□□□ -0.01
Cspg4Q8VHY0 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
Cspg4Q8VHY0 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC14.99□□□□□ -0.01
Cspg4Q8VHY0 Gm45328-201ENSMUST00000210942 917 ntBASIC14.99□□□□□ -0.01
Cspg4Q8VHY0 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cspg4Q8VHY0 AC121961.1-201ENSMUST00000218594 1779 ntBASIC14.99□□□□□ -0.01
Cspg4Q8VHY0 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cspg4Q8VHY0 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Cspg4Q8VHY0 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cspg4Q8VHY0 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cspg4Q8VHY0 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cspg4Q8VHY0 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Cspg4Q8VHY0 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
Cspg4Q8VHY0 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cspg4Q8VHY0 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
Cspg4Q8VHY0 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cspg4Q8VHY0 Actl10-202ENSMUST00000226583 1501 ntBASIC14.99□□□□□ -0.01
Cspg4Q8VHY0 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC14.99□□□□□ -0.01
Cspg4Q8VHY0 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC14.99□□□□□ -0.01
Cspg4Q8VHY0 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cspg4Q8VHY0 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cspg4Q8VHY0 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cspg4Q8VHY0 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cspg4Q8VHY0 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cspg4Q8VHY0 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cspg4Q8VHY0 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cspg4Q8VHY0 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cspg4Q8VHY0 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cspg4Q8VHY0 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC14.98□□□□□ -0.01
Cspg4Q8VHY0 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC14.98□□□□□ -0.01
Cspg4Q8VHY0 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cspg4Q8VHY0 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Cspg4Q8VHY0 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cspg4Q8VHY0 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Cspg4Q8VHY0 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cspg4Q8VHY0 Gm37722-201ENSMUST00000193757 208 ntBASIC14.98□□□□□ -0.01
Cspg4Q8VHY0 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC14.98□□□□□ -0.01
Cspg4Q8VHY0 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cspg4Q8VHY0 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC14.98□□□□□ -0.01
Cspg4Q8VHY0 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cspg4Q8VHY0 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cspg4Q8VHY0 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cspg4Q8VHY0 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC14.97□□□□□ -0.01
Cspg4Q8VHY0 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC14.97□□□□□ -0.01
Cspg4Q8VHY0 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cspg4Q8VHY0 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cspg4Q8VHY0 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Cspg4Q8VHY0 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Cspg4Q8VHY0 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Cspg4Q8VHY0 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cspg4Q8VHY0 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Cspg4Q8VHY0 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cspg4Q8VHY0 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cspg4Q8VHY0 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cspg4Q8VHY0 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Cspg4Q8VHY0 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Cspg4Q8VHY0 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Cspg4Q8VHY0 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cspg4Q8VHY0 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Cspg4Q8VHY0 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Cspg4Q8VHY0 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Cspg4Q8VHY0 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
Cspg4Q8VHY0 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC14.96□□□□□ -0.01
Cspg4Q8VHY0 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC14.96□□□□□ -0.01
Cspg4Q8VHY0 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Cspg4Q8VHY0 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Cspg4Q8VHY0 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Cspg4Q8VHY0 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 24.2 ms