Protein–RNA interactions for Protein: Q8VC34

Rpap2, Putative RNA polymerase II subunit B1 CTD phosphatase Rpap2, mousemouse

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpap2Q8VC34 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Rpap2Q8VC34 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Rpap2Q8VC34 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Rpap2Q8VC34 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Rpap2Q8VC34 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Rpap2Q8VC34 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC19.18■□□□□ 0.66
Rpap2Q8VC34 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC19.18■□□□□ 0.66
Rpap2Q8VC34 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Rpap2Q8VC34 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Rpap2Q8VC34 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Rpap2Q8VC34 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Rpap2Q8VC34 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Rpap2Q8VC34 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Rpap2Q8VC34 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Rpap2Q8VC34 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Rpap2Q8VC34 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Rpap2Q8VC34 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Rpap2Q8VC34 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Rpap2Q8VC34 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Rpap2Q8VC34 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Rpap2Q8VC34 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Rpap2Q8VC34 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC19.17■□□□□ 0.66
Rpap2Q8VC34 AC175538.1-201ENSMUST00000225343 1269 ntBASIC19.17■□□□□ 0.66
Rpap2Q8VC34 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Rpap2Q8VC34 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Rpap2Q8VC34 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Rpap2Q8VC34 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC19.17■□□□□ 0.66
Rpap2Q8VC34 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Rpap2Q8VC34 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC19.17■□□□□ 0.66
Rpap2Q8VC34 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Rpap2Q8VC34 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC19.17■□□□□ 0.66
Rpap2Q8VC34 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC19.17■□□□□ 0.66
Rpap2Q8VC34 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Rpap2Q8VC34 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC19.16■□□□□ 0.66
Rpap2Q8VC34 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Rpap2Q8VC34 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC19.16■□□□□ 0.66
Rpap2Q8VC34 Gm9694-201ENSMUST00000193347 1189 ntBASIC19.16■□□□□ 0.66
Rpap2Q8VC34 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Rpap2Q8VC34 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Rpap2Q8VC34 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Rpap2Q8VC34 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Rpap2Q8VC34 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Rpap2Q8VC34 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Rpap2Q8VC34 Gm19721-201ENSMUST00000195284 1764 ntBASIC19.16■□□□□ 0.66
Rpap2Q8VC34 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Rpap2Q8VC34 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Rpap2Q8VC34 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Rpap2Q8VC34 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
Rpap2Q8VC34 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Rpap2Q8VC34 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Rpap2Q8VC34 Mir1199-201ENSMUST00000117015 119 ntBASIC19.15■□□□□ 0.66
Rpap2Q8VC34 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC19.15■□□□□ 0.66
Rpap2Q8VC34 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Rpap2Q8VC34 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Rpap2Q8VC34 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Rpap2Q8VC34 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Rpap2Q8VC34 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
Rpap2Q8VC34 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Rpap2Q8VC34 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
Rpap2Q8VC34 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
Rpap2Q8VC34 Gm7712-202ENSMUST00000222331 1510 ntBASIC19.15■□□□□ 0.66
Rpap2Q8VC34 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.66
Rpap2Q8VC34 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.66
Rpap2Q8VC34 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
Rpap2Q8VC34 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
Rpap2Q8VC34 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
Rpap2Q8VC34 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Rpap2Q8VC34 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC19.14■□□□□ 0.65
Rpap2Q8VC34 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC19.14■□□□□ 0.65
Rpap2Q8VC34 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Rpap2Q8VC34 Gm10812-201ENSMUST00000099864 546 ntBASIC19.14■□□□□ 0.65
Rpap2Q8VC34 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC19.14■□□□□ 0.65
Rpap2Q8VC34 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Rpap2Q8VC34 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Rpap2Q8VC34 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC19.14■□□□□ 0.65
Rpap2Q8VC34 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
Rpap2Q8VC34 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Rpap2Q8VC34 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC19.14■□□□□ 0.65
Rpap2Q8VC34 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Rpap2Q8VC34 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC19.14■□□□□ 0.65
Rpap2Q8VC34 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Rpap2Q8VC34 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Rpap2Q8VC34 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC19.13■□□□□ 0.65
Rpap2Q8VC34 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC19.13■□□□□ 0.65
Rpap2Q8VC34 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Rpap2Q8VC34 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Rpap2Q8VC34 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Rpap2Q8VC34 Gm24841-201ENSMUST00000158676 357 ntBASIC19.13■□□□□ 0.65
Rpap2Q8VC34 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC19.13■□□□□ 0.65
Rpap2Q8VC34 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC19.13■□□□□ 0.65
Rpap2Q8VC34 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC19.13■□□□□ 0.65
Rpap2Q8VC34 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC19.13■□□□□ 0.65
Rpap2Q8VC34 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
Rpap2Q8VC34 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Rpap2Q8VC34 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC19.13■□□□□ 0.65
Rpap2Q8VC34 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Rpap2Q8VC34 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Rpap2Q8VC34 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Rpap2Q8VC34 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Rpap2Q8VC34 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 21.8 ms