Protein–RNA interactions for Protein: Q8R5K2

Usp33, Ubiquitin carboxyl-terminal hydrolase 33, mousemouse

Predictions only

Length 909 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp33Q8R5K2 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC20.08■□□□□ 0.8
Usp33Q8R5K2 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Usp33Q8R5K2 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
Usp33Q8R5K2 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC20.07■□□□□ 0.8
Usp33Q8R5K2 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Usp33Q8R5K2 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Usp33Q8R5K2 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Usp33Q8R5K2 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Usp33Q8R5K2 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Usp33Q8R5K2 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
Usp33Q8R5K2 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Usp33Q8R5K2 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC20.07■□□□□ 0.8
Usp33Q8R5K2 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
Usp33Q8R5K2 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC20.07■□□□□ 0.8
Usp33Q8R5K2 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Usp33Q8R5K2 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
Usp33Q8R5K2 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Usp33Q8R5K2 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Usp33Q8R5K2 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC20.06■□□□□ 0.8
Usp33Q8R5K2 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC20.06■□□□□ 0.8
Usp33Q8R5K2 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Usp33Q8R5K2 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
Usp33Q8R5K2 Gm29791-202ENSMUST00000207888 369 ntBASIC20.06■□□□□ 0.8
Usp33Q8R5K2 Gm9731-201ENSMUST00000209480 747 ntBASIC20.06■□□□□ 0.8
Usp33Q8R5K2 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Usp33Q8R5K2 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
Usp33Q8R5K2 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Usp33Q8R5K2 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Usp33Q8R5K2 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Usp33Q8R5K2 Gm7856-201ENSMUST00000117514 1493 ntBASIC20.05■□□□□ 0.8
Usp33Q8R5K2 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Usp33Q8R5K2 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Usp33Q8R5K2 Gm9885-202ENSMUST00000186234 2209 ntBASIC20.05■□□□□ 0.8
Usp33Q8R5K2 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC20.05■□□□□ 0.8
Usp33Q8R5K2 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Usp33Q8R5K2 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC20.05■□□□□ 0.8
Usp33Q8R5K2 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Usp33Q8R5K2 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
Usp33Q8R5K2 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Usp33Q8R5K2 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC20.05■□□□□ 0.8
Usp33Q8R5K2 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Usp33Q8R5K2 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC20.04■□□□□ 0.8
Usp33Q8R5K2 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Usp33Q8R5K2 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Usp33Q8R5K2 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Usp33Q8R5K2 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
Usp33Q8R5K2 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
Usp33Q8R5K2 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Usp33Q8R5K2 Gm11355-201ENSMUST00000121120 306 ntBASIC20.04■□□□□ 0.8
Usp33Q8R5K2 Gm18669-201ENSMUST00000216049 778 ntBASIC20.04■□□□□ 0.8
Usp33Q8R5K2 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
Usp33Q8R5K2 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Usp33Q8R5K2 BC021767-201ENSMUST00000126387 1716 ntBASIC20.04■□□□□ 0.8
Usp33Q8R5K2 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Usp33Q8R5K2 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Usp33Q8R5K2 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Usp33Q8R5K2 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Usp33Q8R5K2 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Usp33Q8R5K2 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Usp33Q8R5K2 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
Usp33Q8R5K2 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
Usp33Q8R5K2 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Usp33Q8R5K2 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
Usp33Q8R5K2 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
Usp33Q8R5K2 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC20.03■□□□□ 0.8
Usp33Q8R5K2 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Usp33Q8R5K2 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Usp33Q8R5K2 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Usp33Q8R5K2 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Usp33Q8R5K2 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Usp33Q8R5K2 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Usp33Q8R5K2 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC20.02■□□□□ 0.8
Usp33Q8R5K2 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Usp33Q8R5K2 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
Usp33Q8R5K2 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Usp33Q8R5K2 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Usp33Q8R5K2 Gm7153-201ENSMUST00000117092 455 ntBASIC20.02■□□□□ 0.8
Usp33Q8R5K2 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC20.02■□□□□ 0.8
Usp33Q8R5K2 Gm37025-201ENSMUST00000195159 829 ntBASIC20.02■□□□□ 0.8
Usp33Q8R5K2 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Usp33Q8R5K2 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Usp33Q8R5K2 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Usp33Q8R5K2 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC20.02■□□□□ 0.8
Usp33Q8R5K2 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Usp33Q8R5K2 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Usp33Q8R5K2 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Usp33Q8R5K2 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Usp33Q8R5K2 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Usp33Q8R5K2 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Usp33Q8R5K2 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
Usp33Q8R5K2 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Usp33Q8R5K2 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Usp33Q8R5K2 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Usp33Q8R5K2 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Usp33Q8R5K2 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Usp33Q8R5K2 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Usp33Q8R5K2 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
Usp33Q8R5K2 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Usp33Q8R5K2 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
Usp33Q8R5K2 Tgds-204ENSMUST00000228543 1594 ntBASIC20■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 34.3 ms