Protein–RNA interactions for Protein: Q8R1N4

Nudcd3, NudC domain-containing protein 3, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nudcd3Q8R1N4 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Nudcd3Q8R1N4 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Nudcd3Q8R1N4 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Nudcd3Q8R1N4 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC17.51■□□□□ 0.39
Nudcd3Q8R1N4 Nespas-201ENSMUST00000143738 1083 ntBASIC17.51■□□□□ 0.39
Nudcd3Q8R1N4 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC17.51■□□□□ 0.39
Nudcd3Q8R1N4 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC17.51■□□□□ 0.39
Nudcd3Q8R1N4 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Nudcd3Q8R1N4 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Nudcd3Q8R1N4 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC17.51■□□□□ 0.39
Nudcd3Q8R1N4 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Nudcd3Q8R1N4 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Nudcd3Q8R1N4 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Nudcd3Q8R1N4 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Nudcd3Q8R1N4 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Nudcd3Q8R1N4 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Nudcd3Q8R1N4 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Nudcd3Q8R1N4 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Nudcd3Q8R1N4 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Nudcd3Q8R1N4 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Nudcd3Q8R1N4 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Nudcd3Q8R1N4 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Nudcd3Q8R1N4 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
Nudcd3Q8R1N4 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC17.5■□□□□ 0.39
Nudcd3Q8R1N4 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
Nudcd3Q8R1N4 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Nudcd3Q8R1N4 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Nudcd3Q8R1N4 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
Nudcd3Q8R1N4 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC17.5■□□□□ 0.39
Nudcd3Q8R1N4 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Nudcd3Q8R1N4 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Nudcd3Q8R1N4 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Nudcd3Q8R1N4 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC17.5■□□□□ 0.39
Nudcd3Q8R1N4 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Nudcd3Q8R1N4 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Nudcd3Q8R1N4 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Nudcd3Q8R1N4 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Nudcd3Q8R1N4 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Nudcd3Q8R1N4 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Nudcd3Q8R1N4 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Nudcd3Q8R1N4 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Nudcd3Q8R1N4 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Nudcd3Q8R1N4 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Nudcd3Q8R1N4 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Nudcd3Q8R1N4 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Nudcd3Q8R1N4 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Nudcd3Q8R1N4 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC17.49■□□□□ 0.39
Nudcd3Q8R1N4 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC17.49■□□□□ 0.39
Nudcd3Q8R1N4 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Nudcd3Q8R1N4 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC17.49■□□□□ 0.39
Nudcd3Q8R1N4 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Nudcd3Q8R1N4 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Nudcd3Q8R1N4 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Nudcd3Q8R1N4 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Nudcd3Q8R1N4 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Nudcd3Q8R1N4 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Nudcd3Q8R1N4 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Nudcd3Q8R1N4 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Nudcd3Q8R1N4 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Nudcd3Q8R1N4 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
Nudcd3Q8R1N4 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Nudcd3Q8R1N4 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Nudcd3Q8R1N4 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC17.48■□□□□ 0.39
Nudcd3Q8R1N4 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Nudcd3Q8R1N4 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Nudcd3Q8R1N4 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Nudcd3Q8R1N4 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Nudcd3Q8R1N4 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Nudcd3Q8R1N4 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Nudcd3Q8R1N4 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Nudcd3Q8R1N4 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
Nudcd3Q8R1N4 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC17.48■□□□□ 0.39
Nudcd3Q8R1N4 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Nudcd3Q8R1N4 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Nudcd3Q8R1N4 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC17.48■□□□□ 0.39
Nudcd3Q8R1N4 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Nudcd3Q8R1N4 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Nudcd3Q8R1N4 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Nudcd3Q8R1N4 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Nudcd3Q8R1N4 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Nudcd3Q8R1N4 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Nudcd3Q8R1N4 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Nudcd3Q8R1N4 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Nudcd3Q8R1N4 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Nudcd3Q8R1N4 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
Nudcd3Q8R1N4 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Nudcd3Q8R1N4 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Nudcd3Q8R1N4 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Nudcd3Q8R1N4 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Nudcd3Q8R1N4 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Nudcd3Q8R1N4 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC17.47■□□□□ 0.39
Nudcd3Q8R1N4 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC17.47■□□□□ 0.39
Nudcd3Q8R1N4 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC17.47■□□□□ 0.39
Nudcd3Q8R1N4 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Nudcd3Q8R1N4 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC17.47■□□□□ 0.39
Nudcd3Q8R1N4 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Nudcd3Q8R1N4 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Nudcd3Q8R1N4 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Nudcd3Q8R1N4 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Nudcd3Q8R1N4 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms