Protein–RNA interactions for Protein: Q8R1M2

H2afj, Histone H2A.J, mousemouse

Predictions only

Length 129 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afjQ8R1M2 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
H2afjQ8R1M2 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC16.26■□□□□ 0.19
H2afjQ8R1M2 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC16.26■□□□□ 0.19
H2afjQ8R1M2 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
H2afjQ8R1M2 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
H2afjQ8R1M2 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
H2afjQ8R1M2 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
H2afjQ8R1M2 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
H2afjQ8R1M2 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
H2afjQ8R1M2 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
H2afjQ8R1M2 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
H2afjQ8R1M2 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
H2afjQ8R1M2 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
H2afjQ8R1M2 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
H2afjQ8R1M2 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
H2afjQ8R1M2 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
H2afjQ8R1M2 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
H2afjQ8R1M2 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
H2afjQ8R1M2 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC16.25■□□□□ 0.19
H2afjQ8R1M2 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
H2afjQ8R1M2 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
H2afjQ8R1M2 Gm26571-201ENSMUST00000181399 666 ntBASIC16.25■□□□□ 0.19
H2afjQ8R1M2 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
H2afjQ8R1M2 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
H2afjQ8R1M2 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
H2afjQ8R1M2 Gm38345-201ENSMUST00000192635 1748 ntBASIC16.25■□□□□ 0.19
H2afjQ8R1M2 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
H2afjQ8R1M2 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
H2afjQ8R1M2 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
H2afjQ8R1M2 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC16.24■□□□□ 0.19
H2afjQ8R1M2 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC16.24■□□□□ 0.19
H2afjQ8R1M2 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
H2afjQ8R1M2 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
H2afjQ8R1M2 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
H2afjQ8R1M2 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
H2afjQ8R1M2 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
H2afjQ8R1M2 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC16.24■□□□□ 0.19
H2afjQ8R1M2 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC16.24■□□□□ 0.19
H2afjQ8R1M2 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC16.24■□□□□ 0.19
H2afjQ8R1M2 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC16.24■□□□□ 0.19
H2afjQ8R1M2 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
H2afjQ8R1M2 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
H2afjQ8R1M2 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
H2afjQ8R1M2 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC16.24■□□□□ 0.19
H2afjQ8R1M2 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
H2afjQ8R1M2 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
H2afjQ8R1M2 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
H2afjQ8R1M2 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
H2afjQ8R1M2 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
H2afjQ8R1M2 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
H2afjQ8R1M2 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
H2afjQ8R1M2 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
H2afjQ8R1M2 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
H2afjQ8R1M2 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
H2afjQ8R1M2 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
H2afjQ8R1M2 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
H2afjQ8R1M2 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC16.23■□□□□ 0.19
H2afjQ8R1M2 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
H2afjQ8R1M2 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
H2afjQ8R1M2 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
H2afjQ8R1M2 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
H2afjQ8R1M2 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
H2afjQ8R1M2 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC16.23■□□□□ 0.19
H2afjQ8R1M2 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
H2afjQ8R1M2 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
H2afjQ8R1M2 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
H2afjQ8R1M2 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
H2afjQ8R1M2 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
H2afjQ8R1M2 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
H2afjQ8R1M2 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
H2afjQ8R1M2 Gm10849-201ENSMUST00000100397 618 ntBASIC16.22■□□□□ 0.19
H2afjQ8R1M2 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
H2afjQ8R1M2 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC16.22■□□□□ 0.19
H2afjQ8R1M2 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
H2afjQ8R1M2 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
H2afjQ8R1M2 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
H2afjQ8R1M2 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
H2afjQ8R1M2 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
H2afjQ8R1M2 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
H2afjQ8R1M2 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
H2afjQ8R1M2 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
H2afjQ8R1M2 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
H2afjQ8R1M2 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
H2afjQ8R1M2 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
H2afjQ8R1M2 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC16.21■□□□□ 0.19
H2afjQ8R1M2 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
H2afjQ8R1M2 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
H2afjQ8R1M2 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
H2afjQ8R1M2 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
H2afjQ8R1M2 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
H2afjQ8R1M2 Gm42555-201ENSMUST00000199304 1039 ntBASIC16.21■□□□□ 0.19
H2afjQ8R1M2 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
H2afjQ8R1M2 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
H2afjQ8R1M2 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
H2afjQ8R1M2 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
H2afjQ8R1M2 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
H2afjQ8R1M2 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
H2afjQ8R1M2 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC16.21■□□□□ 0.19
H2afjQ8R1M2 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
H2afjQ8R1M2 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC16.21■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 24.6 ms