Protein–RNA interactions for Protein: Q8K2I2

Cchcr1, Coiled-coil alpha-helical rod protein 1, mousemouse

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cchcr1Q8K2I2 Dio3-201ENSMUST00000097228 1449 ntBASIC20.7■□□□□ 0.9
Cchcr1Q8K2I2 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Cchcr1Q8K2I2 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Cchcr1Q8K2I2 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Cchcr1Q8K2I2 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Cchcr1Q8K2I2 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Cchcr1Q8K2I2 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
Cchcr1Q8K2I2 Gm15635-204ENSMUST00000208024 2539 ntBASIC20.69■□□□□ 0.9
Cchcr1Q8K2I2 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Cchcr1Q8K2I2 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Cchcr1Q8K2I2 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC20.69■□□□□ 0.9
Cchcr1Q8K2I2 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
Cchcr1Q8K2I2 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Cchcr1Q8K2I2 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC20.68■□□□□ 0.9
Cchcr1Q8K2I2 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Cchcr1Q8K2I2 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Cchcr1Q8K2I2 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Cchcr1Q8K2I2 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC20.68■□□□□ 0.9
Cchcr1Q8K2I2 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Cchcr1Q8K2I2 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC20.68■□□□□ 0.9
Cchcr1Q8K2I2 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Cchcr1Q8K2I2 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Cchcr1Q8K2I2 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Cchcr1Q8K2I2 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
Cchcr1Q8K2I2 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Cchcr1Q8K2I2 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Cchcr1Q8K2I2 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Cchcr1Q8K2I2 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Cchcr1Q8K2I2 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Cchcr1Q8K2I2 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC20.67■□□□□ 0.9
Cchcr1Q8K2I2 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC20.67■□□□□ 0.9
Cchcr1Q8K2I2 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Cchcr1Q8K2I2 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC20.67■□□□□ 0.9
Cchcr1Q8K2I2 Gm13401-201ENSMUST00000117074 291 ntBASIC20.67■□□□□ 0.9
Cchcr1Q8K2I2 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Cchcr1Q8K2I2 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC20.67■□□□□ 0.9
Cchcr1Q8K2I2 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Cchcr1Q8K2I2 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
Cchcr1Q8K2I2 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC20.67■□□□□ 0.9
Cchcr1Q8K2I2 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Cchcr1Q8K2I2 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Cchcr1Q8K2I2 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Cchcr1Q8K2I2 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Cchcr1Q8K2I2 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
Cchcr1Q8K2I2 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Cchcr1Q8K2I2 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Cchcr1Q8K2I2 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Cchcr1Q8K2I2 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Cchcr1Q8K2I2 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Cchcr1Q8K2I2 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC20.66■□□□□ 0.9
Cchcr1Q8K2I2 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Cchcr1Q8K2I2 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Cchcr1Q8K2I2 Gm10602-201ENSMUST00000098239 609 ntBASIC20.66■□□□□ 0.9
Cchcr1Q8K2I2 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Cchcr1Q8K2I2 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
Cchcr1Q8K2I2 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Cchcr1Q8K2I2 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Cchcr1Q8K2I2 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
Cchcr1Q8K2I2 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
Cchcr1Q8K2I2 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
Cchcr1Q8K2I2 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Cchcr1Q8K2I2 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
Cchcr1Q8K2I2 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Cchcr1Q8K2I2 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Cchcr1Q8K2I2 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Cchcr1Q8K2I2 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Cchcr1Q8K2I2 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Cchcr1Q8K2I2 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Cchcr1Q8K2I2 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC20.65■□□□□ 0.9
Cchcr1Q8K2I2 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Cchcr1Q8K2I2 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC20.65■□□□□ 0.9
Cchcr1Q8K2I2 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Cchcr1Q8K2I2 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC20.65■□□□□ 0.9
Cchcr1Q8K2I2 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Cchcr1Q8K2I2 Gm15375-201ENSMUST00000119510 849 ntBASIC20.65■□□□□ 0.9
Cchcr1Q8K2I2 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC20.65■□□□□ 0.9
Cchcr1Q8K2I2 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC20.65■□□□□ 0.9
Cchcr1Q8K2I2 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC20.65■□□□□ 0.9
Cchcr1Q8K2I2 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Cchcr1Q8K2I2 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Cchcr1Q8K2I2 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
Cchcr1Q8K2I2 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Cchcr1Q8K2I2 Gm43338-201ENSMUST00000198617 2223 ntBASIC20.65■□□□□ 0.9
Cchcr1Q8K2I2 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
Cchcr1Q8K2I2 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Cchcr1Q8K2I2 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
Cchcr1Q8K2I2 Gm10654-201ENSMUST00000098653 1633 ntBASIC20.64■□□□□ 0.9
Cchcr1Q8K2I2 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.9
Cchcr1Q8K2I2 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
Cchcr1Q8K2I2 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
Cchcr1Q8K2I2 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
Cchcr1Q8K2I2 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC20.64■□□□□ 0.89
Cchcr1Q8K2I2 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Cchcr1Q8K2I2 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Cchcr1Q8K2I2 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Cchcr1Q8K2I2 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Cchcr1Q8K2I2 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Cchcr1Q8K2I2 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Cchcr1Q8K2I2 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC20.64■□□□□ 0.89
Cchcr1Q8K2I2 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 33.8 ms