Protein–RNA interactions for Protein: Q8K021

Scamp1, Secretory carrier-associated membrane protein 1, mousemouse

Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scamp1Q8K021 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Scamp1Q8K021 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Scamp1Q8K021 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Scamp1Q8K021 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Scamp1Q8K021 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
Scamp1Q8K021 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Scamp1Q8K021 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Scamp1Q8K021 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC17.12■□□□□ 0.33
Scamp1Q8K021 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC17.12■□□□□ 0.33
Scamp1Q8K021 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Scamp1Q8K021 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC17.12■□□□□ 0.33
Scamp1Q8K021 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Scamp1Q8K021 Gm4974-201ENSMUST00000209974 875 ntBASIC17.12■□□□□ 0.33
Scamp1Q8K021 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
Scamp1Q8K021 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Scamp1Q8K021 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Scamp1Q8K021 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Scamp1Q8K021 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Scamp1Q8K021 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Scamp1Q8K021 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Scamp1Q8K021 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Scamp1Q8K021 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Scamp1Q8K021 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC17.12■□□□□ 0.33
Scamp1Q8K021 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Scamp1Q8K021 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Scamp1Q8K021 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC17.12■□□□□ 0.33
Scamp1Q8K021 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Scamp1Q8K021 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC17.12■□□□□ 0.33
Scamp1Q8K021 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Scamp1Q8K021 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Scamp1Q8K021 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Scamp1Q8K021 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Scamp1Q8K021 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Scamp1Q8K021 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Scamp1Q8K021 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Scamp1Q8K021 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Scamp1Q8K021 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Scamp1Q8K021 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC17.11■□□□□ 0.33
Scamp1Q8K021 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Scamp1Q8K021 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Scamp1Q8K021 Gm5953-201ENSMUST00000220644 2616 ntBASIC17.11■□□□□ 0.33
Scamp1Q8K021 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Scamp1Q8K021 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Scamp1Q8K021 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Scamp1Q8K021 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Scamp1Q8K021 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Scamp1Q8K021 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Scamp1Q8K021 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Scamp1Q8K021 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Scamp1Q8K021 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Scamp1Q8K021 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC17.1■□□□□ 0.33
Scamp1Q8K021 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Scamp1Q8K021 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Scamp1Q8K021 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Scamp1Q8K021 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC17.1■□□□□ 0.33
Scamp1Q8K021 Gm29791-202ENSMUST00000207888 369 ntBASIC17.1■□□□□ 0.33
Scamp1Q8K021 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Scamp1Q8K021 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Scamp1Q8K021 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC17.1■□□□□ 0.33
Scamp1Q8K021 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Scamp1Q8K021 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Scamp1Q8K021 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Scamp1Q8K021 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC17.1■□□□□ 0.33
Scamp1Q8K021 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Scamp1Q8K021 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Scamp1Q8K021 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Scamp1Q8K021 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Scamp1Q8K021 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Scamp1Q8K021 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Scamp1Q8K021 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Scamp1Q8K021 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Scamp1Q8K021 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC17.09■□□□□ 0.33
Scamp1Q8K021 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Scamp1Q8K021 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Scamp1Q8K021 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Scamp1Q8K021 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Scamp1Q8K021 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Scamp1Q8K021 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Scamp1Q8K021 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Scamp1Q8K021 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Scamp1Q8K021 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Scamp1Q8K021 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Scamp1Q8K021 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Scamp1Q8K021 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Scamp1Q8K021 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Scamp1Q8K021 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC17.08■□□□□ 0.33
Scamp1Q8K021 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Scamp1Q8K021 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Scamp1Q8K021 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Scamp1Q8K021 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Scamp1Q8K021 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
Scamp1Q8K021 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Scamp1Q8K021 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Scamp1Q8K021 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC17.08■□□□□ 0.32
Scamp1Q8K021 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC17.08■□□□□ 0.32
Scamp1Q8K021 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Scamp1Q8K021 Gm38027-201ENSMUST00000192315 235 ntBASIC17.08■□□□□ 0.32
Scamp1Q8K021 AC159205.6-201ENSMUST00000224935 887 ntBASIC17.08■□□□□ 0.32
Scamp1Q8K021 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Scamp1Q8K021 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 21.1 ms