Protein–RNA interactions for Protein: Q8CG50

Rab43, Ras-related protein Rab-43, mousemouse

Predictions only

Length 210 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab43Q8CG50 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rab43Q8CG50 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rab43Q8CG50 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rab43Q8CG50 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rab43Q8CG50 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rab43Q8CG50 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Rab43Q8CG50 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Rab43Q8CG50 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC17.03■□□□□ 0.32
Rab43Q8CG50 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rab43Q8CG50 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC17.03■□□□□ 0.32
Rab43Q8CG50 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rab43Q8CG50 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Rab43Q8CG50 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rab43Q8CG50 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rab43Q8CG50 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC17.03■□□□□ 0.32
Rab43Q8CG50 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
Rab43Q8CG50 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
Rab43Q8CG50 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC17.03■□□□□ 0.32
Rab43Q8CG50 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rab43Q8CG50 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Rab43Q8CG50 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rab43Q8CG50 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rab43Q8CG50 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Rab43Q8CG50 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Rab43Q8CG50 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Rab43Q8CG50 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Rab43Q8CG50 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC17.02■□□□□ 0.32
Rab43Q8CG50 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC17.02■□□□□ 0.32
Rab43Q8CG50 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Rab43Q8CG50 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC17.02■□□□□ 0.32
Rab43Q8CG50 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Rab43Q8CG50 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Rab43Q8CG50 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Rab43Q8CG50 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
Rab43Q8CG50 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.31
Rab43Q8CG50 Gm43213-201ENSMUST00000151866 1790 ntBASIC17.02■□□□□ 0.31
Rab43Q8CG50 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Rab43Q8CG50 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Rab43Q8CG50 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Rab43Q8CG50 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Rab43Q8CG50 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rab43Q8CG50 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rab43Q8CG50 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rab43Q8CG50 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Rab43Q8CG50 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Rab43Q8CG50 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Rab43Q8CG50 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC17.01■□□□□ 0.31
Rab43Q8CG50 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC17.01■□□□□ 0.31
Rab43Q8CG50 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC17.01■□□□□ 0.31
Rab43Q8CG50 Il3ra-202ENSMUST00000223589 738 ntBASIC17.01■□□□□ 0.31
Rab43Q8CG50 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rab43Q8CG50 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
Rab43Q8CG50 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Rab43Q8CG50 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Rab43Q8CG50 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rab43Q8CG50 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Rab43Q8CG50 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rab43Q8CG50 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rab43Q8CG50 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rab43Q8CG50 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Rab43Q8CG50 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Rab43Q8CG50 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
Rab43Q8CG50 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Rab43Q8CG50 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
Rab43Q8CG50 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Rab43Q8CG50 Mir1668-201ENSMUST00000184114 107 ntBASIC17■□□□□ 0.31
Rab43Q8CG50 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC17■□□□□ 0.31
Rab43Q8CG50 Gm7370-201ENSMUST00000219471 767 ntBASIC17■□□□□ 0.31
Rab43Q8CG50 Gm21559-201ENSMUST00000220638 855 ntBASIC17■□□□□ 0.31
Rab43Q8CG50 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Rab43Q8CG50 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Rab43Q8CG50 Gm8587-201ENSMUST00000076538 843 ntBASIC17■□□□□ 0.31
Rab43Q8CG50 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Rab43Q8CG50 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Rab43Q8CG50 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC17■□□□□ 0.31
Rab43Q8CG50 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Rab43Q8CG50 Spsb2-203ENSMUST00000112473 1322 ntBASIC16.99■□□□□ 0.31
Rab43Q8CG50 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
Rab43Q8CG50 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Rab43Q8CG50 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Rab43Q8CG50 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Rab43Q8CG50 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Rab43Q8CG50 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Rab43Q8CG50 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Rab43Q8CG50 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Rab43Q8CG50 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Rab43Q8CG50 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Rab43Q8CG50 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Rab43Q8CG50 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Rab43Q8CG50 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Rab43Q8CG50 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Rab43Q8CG50 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Rab43Q8CG50 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
Rab43Q8CG50 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Rab43Q8CG50 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Rab43Q8CG50 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC16.98■□□□□ 0.31
Rab43Q8CG50 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Rab43Q8CG50 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Rab43Q8CG50 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC16.98■□□□□ 0.31
Rab43Q8CG50 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC16.98■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms