Protein–RNA interactions for Protein: Q8CE50

Snx30, Sorting nexin-30, mousemouse

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snx30Q8CE50 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Snx30Q8CE50 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Snx30Q8CE50 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Snx30Q8CE50 Gm15375-201ENSMUST00000119510 849 ntBASIC18.02■□□□□ 0.48
Snx30Q8CE50 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Snx30Q8CE50 Gm18666-201ENSMUST00000190039 958 ntBASIC18.02■□□□□ 0.48
Snx30Q8CE50 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
Snx30Q8CE50 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
Snx30Q8CE50 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Snx30Q8CE50 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.47
Snx30Q8CE50 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
Snx30Q8CE50 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC18.02■□□□□ 0.47
Snx30Q8CE50 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Snx30Q8CE50 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Snx30Q8CE50 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Snx30Q8CE50 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Snx30Q8CE50 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
Snx30Q8CE50 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Snx30Q8CE50 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
Snx30Q8CE50 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Snx30Q8CE50 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
Snx30Q8CE50 Gm27011-201ENSMUST00000182352 972 ntBASIC18.01■□□□□ 0.47
Snx30Q8CE50 Mir6349-201ENSMUST00000184059 97 ntBASIC18.01■□□□□ 0.47
Snx30Q8CE50 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC18.01■□□□□ 0.47
Snx30Q8CE50 Zcchc6-207ENSMUST00000225576 2499 ntBASIC18.01■□□□□ 0.47
Snx30Q8CE50 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Snx30Q8CE50 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Snx30Q8CE50 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
Snx30Q8CE50 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
Snx30Q8CE50 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC18.01■□□□□ 0.47
Snx30Q8CE50 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Snx30Q8CE50 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Snx30Q8CE50 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Snx30Q8CE50 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC18.01■□□□□ 0.47
Snx30Q8CE50 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Snx30Q8CE50 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Snx30Q8CE50 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
Snx30Q8CE50 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC18■□□□□ 0.47
Snx30Q8CE50 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC18■□□□□ 0.47
Snx30Q8CE50 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Snx30Q8CE50 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC18■□□□□ 0.47
Snx30Q8CE50 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Snx30Q8CE50 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Snx30Q8CE50 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC18■□□□□ 0.47
Snx30Q8CE50 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC18■□□□□ 0.47
Snx30Q8CE50 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Snx30Q8CE50 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
Snx30Q8CE50 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
Snx30Q8CE50 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC18■□□□□ 0.47
Snx30Q8CE50 Gm45560-201ENSMUST00000211492 1472 ntBASIC18■□□□□ 0.47
Snx30Q8CE50 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Snx30Q8CE50 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
Snx30Q8CE50 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Snx30Q8CE50 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Snx30Q8CE50 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
Snx30Q8CE50 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Snx30Q8CE50 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Snx30Q8CE50 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC17.99■□□□□ 0.47
Snx30Q8CE50 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Snx30Q8CE50 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Snx30Q8CE50 Gm29241-201ENSMUST00000189260 1096 ntBASIC17.99■□□□□ 0.47
Snx30Q8CE50 Spcs1-207ENSMUST00000228767 1008 ntBASIC17.99■□□□□ 0.47
Snx30Q8CE50 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
Snx30Q8CE50 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
Snx30Q8CE50 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC17.99■□□□□ 0.47
Snx30Q8CE50 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC17.99■□□□□ 0.47
Snx30Q8CE50 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
Snx30Q8CE50 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Snx30Q8CE50 Nrn1-203ENSMUST00000223611 1443 ntBASIC17.98■□□□□ 0.47
Snx30Q8CE50 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
Snx30Q8CE50 Gm5643-201ENSMUST00000117081 966 ntBASIC17.98■□□□□ 0.47
Snx30Q8CE50 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Snx30Q8CE50 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Snx30Q8CE50 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Snx30Q8CE50 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Snx30Q8CE50 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Snx30Q8CE50 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Snx30Q8CE50 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Snx30Q8CE50 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
Snx30Q8CE50 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Snx30Q8CE50 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Snx30Q8CE50 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Snx30Q8CE50 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Snx30Q8CE50 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Snx30Q8CE50 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Snx30Q8CE50 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Snx30Q8CE50 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Snx30Q8CE50 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Snx30Q8CE50 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
Snx30Q8CE50 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC17.97■□□□□ 0.47
Snx30Q8CE50 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Snx30Q8CE50 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC17.97■□□□□ 0.47
Snx30Q8CE50 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Snx30Q8CE50 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Snx30Q8CE50 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
Snx30Q8CE50 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Snx30Q8CE50 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Snx30Q8CE50 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Snx30Q8CE50 Gm10654-201ENSMUST00000098653 1633 ntBASIC17.97■□□□□ 0.47
Snx30Q8CE50 AC154231.1-201ENSMUST00000220564 2175 ntBASIC17.97■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 31.9 ms