Protein–RNA interactions for Protein: Q8C2S0

Usp44, Ubiquitin carboxyl-terminal hydrolase 44, mousemouse

Predictions only

Length 711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp44Q8C2S0 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Usp44Q8C2S0 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Usp44Q8C2S0 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
Usp44Q8C2S0 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Usp44Q8C2S0 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC20.46■□□□□ 0.87
Usp44Q8C2S0 Gm21814-202ENSMUST00000203277 873 ntBASIC20.46■□□□□ 0.87
Usp44Q8C2S0 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC20.46■□□□□ 0.87
Usp44Q8C2S0 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Usp44Q8C2S0 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Usp44Q8C2S0 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
Usp44Q8C2S0 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
Usp44Q8C2S0 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
Usp44Q8C2S0 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Usp44Q8C2S0 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.87
Usp44Q8C2S0 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Usp44Q8C2S0 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Usp44Q8C2S0 Mir5122-201ENSMUST00000175004 89 ntBASIC20.45■□□□□ 0.86
Usp44Q8C2S0 Gm38027-201ENSMUST00000192315 235 ntBASIC20.45■□□□□ 0.86
Usp44Q8C2S0 Arhgef33-211ENSMUST00000225658 473 ntBASIC20.45■□□□□ 0.86
Usp44Q8C2S0 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Usp44Q8C2S0 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
Usp44Q8C2S0 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Usp44Q8C2S0 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Usp44Q8C2S0 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Usp44Q8C2S0 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Usp44Q8C2S0 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Usp44Q8C2S0 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC20.44■□□□□ 0.86
Usp44Q8C2S0 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC20.44■□□□□ 0.86
Usp44Q8C2S0 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC20.44■□□□□ 0.86
Usp44Q8C2S0 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
Usp44Q8C2S0 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Usp44Q8C2S0 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
Usp44Q8C2S0 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
Usp44Q8C2S0 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Usp44Q8C2S0 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Usp44Q8C2S0 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Usp44Q8C2S0 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Usp44Q8C2S0 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Usp44Q8C2S0 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Usp44Q8C2S0 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC20.43■□□□□ 0.86
Usp44Q8C2S0 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Usp44Q8C2S0 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC20.43■□□□□ 0.86
Usp44Q8C2S0 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC20.43■□□□□ 0.86
Usp44Q8C2S0 Timm23-208ENSMUST00000226683 750 ntBASIC20.43■□□□□ 0.86
Usp44Q8C2S0 Otx2os1-204ENSMUST00000227221 751 ntBASIC20.43■□□□□ 0.86
Usp44Q8C2S0 Odf3b-204ENSMUST00000227834 930 ntBASIC20.43■□□□□ 0.86
Usp44Q8C2S0 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Usp44Q8C2S0 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
Usp44Q8C2S0 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Usp44Q8C2S0 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Usp44Q8C2S0 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Usp44Q8C2S0 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Usp44Q8C2S0 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Usp44Q8C2S0 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Usp44Q8C2S0 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Usp44Q8C2S0 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Usp44Q8C2S0 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Usp44Q8C2S0 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Usp44Q8C2S0 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Usp44Q8C2S0 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Usp44Q8C2S0 Gm3375-201ENSMUST00000203929 796 ntBASIC20.42■□□□□ 0.86
Usp44Q8C2S0 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC20.42■□□□□ 0.86
Usp44Q8C2S0 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Usp44Q8C2S0 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Usp44Q8C2S0 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Usp44Q8C2S0 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC20.42■□□□□ 0.86
Usp44Q8C2S0 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Usp44Q8C2S0 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Usp44Q8C2S0 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Usp44Q8C2S0 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Usp44Q8C2S0 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC20.42■□□□□ 0.86
Usp44Q8C2S0 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Usp44Q8C2S0 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC20.41■□□□□ 0.86
Usp44Q8C2S0 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Usp44Q8C2S0 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Usp44Q8C2S0 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Usp44Q8C2S0 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Usp44Q8C2S0 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Usp44Q8C2S0 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC20.41■□□□□ 0.86
Usp44Q8C2S0 AC156016.1-201ENSMUST00000227190 1035 ntBASIC20.41■□□□□ 0.86
Usp44Q8C2S0 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Usp44Q8C2S0 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC20.41■□□□□ 0.86
Usp44Q8C2S0 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC20.41■□□□□ 0.86
Usp44Q8C2S0 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
Usp44Q8C2S0 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Usp44Q8C2S0 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Usp44Q8C2S0 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Usp44Q8C2S0 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Usp44Q8C2S0 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Usp44Q8C2S0 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Usp44Q8C2S0 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Usp44Q8C2S0 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC20.4■□□□□ 0.86
Usp44Q8C2S0 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
Usp44Q8C2S0 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Usp44Q8C2S0 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC20.4■□□□□ 0.86
Usp44Q8C2S0 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Usp44Q8C2S0 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC20.4■□□□□ 0.86
Usp44Q8C2S0 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC20.4■□□□□ 0.86
Usp44Q8C2S0 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Usp44Q8C2S0 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 21.9 ms