Protein–RNA interactions for Protein: Q8C1Q6

Smim4, Small integral membrane protein 4, mousemouse

Predictions only

Length 80 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim4Q8C1Q6 Gm44549-201ENSMUST00000208351 577 ntBASIC14.66□□□□□ -0.06
Smim4Q8C1Q6 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Smim4Q8C1Q6 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
Smim4Q8C1Q6 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Smim4Q8C1Q6 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Smim4Q8C1Q6 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Smim4Q8C1Q6 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Smim4Q8C1Q6 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Smim4Q8C1Q6 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Smim4Q8C1Q6 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Smim4Q8C1Q6 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Smim4Q8C1Q6 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Smim4Q8C1Q6 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Smim4Q8C1Q6 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC14.65□□□□□ -0.06
Smim4Q8C1Q6 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Smim4Q8C1Q6 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Smim4Q8C1Q6 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC14.65□□□□□ -0.06
Smim4Q8C1Q6 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Smim4Q8C1Q6 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
Smim4Q8C1Q6 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Smim4Q8C1Q6 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Smim4Q8C1Q6 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
Smim4Q8C1Q6 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC14.65□□□□□ -0.06
Smim4Q8C1Q6 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Smim4Q8C1Q6 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC14.65□□□□□ -0.06
Smim4Q8C1Q6 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Smim4Q8C1Q6 Gm29791-202ENSMUST00000207888 369 ntBASIC14.65□□□□□ -0.06
Smim4Q8C1Q6 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC14.65□□□□□ -0.06
Smim4Q8C1Q6 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Smim4Q8C1Q6 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Smim4Q8C1Q6 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Smim4Q8C1Q6 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Smim4Q8C1Q6 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Smim4Q8C1Q6 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.07
Smim4Q8C1Q6 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC14.64□□□□□ -0.07
Smim4Q8C1Q6 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Smim4Q8C1Q6 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Smim4Q8C1Q6 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Smim4Q8C1Q6 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Smim4Q8C1Q6 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Smim4Q8C1Q6 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
Smim4Q8C1Q6 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Smim4Q8C1Q6 Gm8495-201ENSMUST00000188740 694 ntBASIC14.64□□□□□ -0.07
Smim4Q8C1Q6 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC14.64□□□□□ -0.07
Smim4Q8C1Q6 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC14.64□□□□□ -0.07
Smim4Q8C1Q6 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Smim4Q8C1Q6 Zfp783-201ENSMUST00000095946 670 ntBASIC14.64□□□□□ -0.07
Smim4Q8C1Q6 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Smim4Q8C1Q6 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC14.64□□□□□ -0.07
Smim4Q8C1Q6 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Smim4Q8C1Q6 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
Smim4Q8C1Q6 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Smim4Q8C1Q6 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Smim4Q8C1Q6 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC14.64□□□□□ -0.07
Smim4Q8C1Q6 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC14.64□□□□□ -0.07
Smim4Q8C1Q6 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC14.64□□□□□ -0.07
Smim4Q8C1Q6 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Smim4Q8C1Q6 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Smim4Q8C1Q6 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Smim4Q8C1Q6 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC14.63□□□□□ -0.07
Smim4Q8C1Q6 AC108858.1-201ENSMUST00000228461 1498 ntBASIC14.63□□□□□ -0.07
Smim4Q8C1Q6 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Smim4Q8C1Q6 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Smim4Q8C1Q6 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Smim4Q8C1Q6 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Smim4Q8C1Q6 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Smim4Q8C1Q6 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC14.63□□□□□ -0.07
Smim4Q8C1Q6 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Smim4Q8C1Q6 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC14.63□□□□□ -0.07
Smim4Q8C1Q6 Mir5133-201ENSMUST00000174955 77 ntBASIC14.63□□□□□ -0.07
Smim4Q8C1Q6 Wnt10b-205ENSMUST00000226846 1204 ntBASIC14.63□□□□□ -0.07
Smim4Q8C1Q6 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Smim4Q8C1Q6 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Smim4Q8C1Q6 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Smim4Q8C1Q6 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Smim4Q8C1Q6 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Smim4Q8C1Q6 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Smim4Q8C1Q6 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Smim4Q8C1Q6 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Smim4Q8C1Q6 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC14.63□□□□□ -0.07
Smim4Q8C1Q6 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Smim4Q8C1Q6 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Smim4Q8C1Q6 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Smim4Q8C1Q6 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Smim4Q8C1Q6 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC14.62□□□□□ -0.07
Smim4Q8C1Q6 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC14.62□□□□□ -0.07
Smim4Q8C1Q6 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Smim4Q8C1Q6 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Smim4Q8C1Q6 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Smim4Q8C1Q6 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
Smim4Q8C1Q6 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Smim4Q8C1Q6 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
Smim4Q8C1Q6 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Smim4Q8C1Q6 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Smim4Q8C1Q6 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC14.62□□□□□ -0.07
Smim4Q8C1Q6 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Smim4Q8C1Q6 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
Smim4Q8C1Q6 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Smim4Q8C1Q6 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Smim4Q8C1Q6 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms