Protein–RNA interactions for Protein: Q8C120

Sh3rf3, SH3 domain-containing RING finger protein 3, mousemouse

Predictions only

Length 878 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf3Q8C120 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Sh3rf3Q8C120 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC18.2■□□□□ 0.5
Sh3rf3Q8C120 Nrn1-203ENSMUST00000223611 1443 ntBASIC18.2■□□□□ 0.5
Sh3rf3Q8C120 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Sh3rf3Q8C120 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Sh3rf3Q8C120 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Sh3rf3Q8C120 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Sh3rf3Q8C120 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Sh3rf3Q8C120 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
Sh3rf3Q8C120 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Sh3rf3Q8C120 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Sh3rf3Q8C120 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Sh3rf3Q8C120 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC18.19■□□□□ 0.5
Sh3rf3Q8C120 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Sh3rf3Q8C120 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC18.19■□□□□ 0.5
Sh3rf3Q8C120 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Sh3rf3Q8C120 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Sh3rf3Q8C120 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC18.19■□□□□ 0.5
Sh3rf3Q8C120 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
Sh3rf3Q8C120 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Sh3rf3Q8C120 Gm18025-201ENSMUST00000221733 862 ntBASIC18.19■□□□□ 0.5
Sh3rf3Q8C120 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Sh3rf3Q8C120 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Sh3rf3Q8C120 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Sh3rf3Q8C120 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Sh3rf3Q8C120 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Sh3rf3Q8C120 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Sh3rf3Q8C120 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC18.19■□□□□ 0.5
Sh3rf3Q8C120 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC18.19■□□□□ 0.5
Sh3rf3Q8C120 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Sh3rf3Q8C120 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC18.19■□□□□ 0.5
Sh3rf3Q8C120 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC18.19■□□□□ 0.5
Sh3rf3Q8C120 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC18.19■□□□□ 0.5
Sh3rf3Q8C120 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC18.18■□□□□ 0.5
Sh3rf3Q8C120 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Sh3rf3Q8C120 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Sh3rf3Q8C120 Gm5643-201ENSMUST00000117081 966 ntBASIC18.18■□□□□ 0.5
Sh3rf3Q8C120 Gm27011-201ENSMUST00000182352 972 ntBASIC18.18■□□□□ 0.5
Sh3rf3Q8C120 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC18.18■□□□□ 0.5
Sh3rf3Q8C120 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC18.18■□□□□ 0.5
Sh3rf3Q8C120 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Sh3rf3Q8C120 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Sh3rf3Q8C120 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Sh3rf3Q8C120 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Sh3rf3Q8C120 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Sh3rf3Q8C120 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Sh3rf3Q8C120 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Sh3rf3Q8C120 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Sh3rf3Q8C120 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Sh3rf3Q8C120 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Sh3rf3Q8C120 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Sh3rf3Q8C120 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Sh3rf3Q8C120 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC18.17■□□□□ 0.5
Sh3rf3Q8C120 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Sh3rf3Q8C120 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Sh3rf3Q8C120 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Sh3rf3Q8C120 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Sh3rf3Q8C120 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Sh3rf3Q8C120 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Sh3rf3Q8C120 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC18.17■□□□□ 0.5
Sh3rf3Q8C120 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC18.17■□□□□ 0.5
Sh3rf3Q8C120 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC18.17■□□□□ 0.5
Sh3rf3Q8C120 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Sh3rf3Q8C120 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC18.17■□□□□ 0.5
Sh3rf3Q8C120 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Sh3rf3Q8C120 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Sh3rf3Q8C120 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Sh3rf3Q8C120 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Sh3rf3Q8C120 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Sh3rf3Q8C120 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Sh3rf3Q8C120 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
Sh3rf3Q8C120 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Sh3rf3Q8C120 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Sh3rf3Q8C120 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Sh3rf3Q8C120 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Sh3rf3Q8C120 H2-K2-201ENSMUST00000174250 1049 ntBASIC18.16■□□□□ 0.5
Sh3rf3Q8C120 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Sh3rf3Q8C120 Gm10698-201ENSMUST00000182663 604 ntBASIC18.16■□□□□ 0.5
Sh3rf3Q8C120 Gm18666-201ENSMUST00000190039 958 ntBASIC18.16■□□□□ 0.5
Sh3rf3Q8C120 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Sh3rf3Q8C120 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC18.16■□□□□ 0.5
Sh3rf3Q8C120 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Sh3rf3Q8C120 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Sh3rf3Q8C120 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Sh3rf3Q8C120 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Sh3rf3Q8C120 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Sh3rf3Q8C120 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Sh3rf3Q8C120 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Sh3rf3Q8C120 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Sh3rf3Q8C120 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Sh3rf3Q8C120 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC18.15■□□□□ 0.5
Sh3rf3Q8C120 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Sh3rf3Q8C120 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC18.15■□□□□ 0.5
Sh3rf3Q8C120 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Sh3rf3Q8C120 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Sh3rf3Q8C120 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
Sh3rf3Q8C120 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC18.15■□□□□ 0.5
Sh3rf3Q8C120 Gm37292-201ENSMUST00000192062 758 ntBASIC18.15■□□□□ 0.5
Sh3rf3Q8C120 AC166341.7-201ENSMUST00000221698 126 ntBASIC18.15■□□□□ 0.5
Sh3rf3Q8C120 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 21.7 ms