Protein–RNA interactions for Protein: Q8BXQ3

Lrtm1, Leucine-rich repeat and transmembrane domain-containing protein 1, mousemouse

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrtm1Q8BXQ3 Gm16042-201ENSMUST00000204813 1247 ntBASIC15.26■□□□□ 0.03
Lrtm1Q8BXQ3 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Lrtm1Q8BXQ3 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Lrtm1Q8BXQ3 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
Lrtm1Q8BXQ3 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Lrtm1Q8BXQ3 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Lrtm1Q8BXQ3 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC15.26■□□□□ 0.03
Lrtm1Q8BXQ3 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Lrtm1Q8BXQ3 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Lrtm1Q8BXQ3 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Lrtm1Q8BXQ3 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Lrtm1Q8BXQ3 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Lrtm1Q8BXQ3 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Lrtm1Q8BXQ3 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Lrtm1Q8BXQ3 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC15.25■□□□□ 0.03
Lrtm1Q8BXQ3 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC15.25■□□□□ 0.03
Lrtm1Q8BXQ3 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Lrtm1Q8BXQ3 Gm10418-201ENSMUST00000100943 576 ntBASIC15.25■□□□□ 0.03
Lrtm1Q8BXQ3 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Lrtm1Q8BXQ3 Gm9484-201ENSMUST00000195892 1159 ntBASIC15.25■□□□□ 0.03
Lrtm1Q8BXQ3 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC15.25■□□□□ 0.03
Lrtm1Q8BXQ3 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Lrtm1Q8BXQ3 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Lrtm1Q8BXQ3 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Lrtm1Q8BXQ3 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Lrtm1Q8BXQ3 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Lrtm1Q8BXQ3 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC15.25■□□□□ 0.03
Lrtm1Q8BXQ3 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Lrtm1Q8BXQ3 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Lrtm1Q8BXQ3 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Lrtm1Q8BXQ3 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
Lrtm1Q8BXQ3 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Lrtm1Q8BXQ3 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Lrtm1Q8BXQ3 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Lrtm1Q8BXQ3 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Lrtm1Q8BXQ3 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Lrtm1Q8BXQ3 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Lrtm1Q8BXQ3 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC15.24■□□□□ 0.03
Lrtm1Q8BXQ3 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Lrtm1Q8BXQ3 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC15.24■□□□□ 0.03
Lrtm1Q8BXQ3 Arhgef33-211ENSMUST00000225658 473 ntBASIC15.24■□□□□ 0.03
Lrtm1Q8BXQ3 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Lrtm1Q8BXQ3 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Lrtm1Q8BXQ3 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Lrtm1Q8BXQ3 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Lrtm1Q8BXQ3 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Lrtm1Q8BXQ3 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
Lrtm1Q8BXQ3 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Lrtm1Q8BXQ3 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Lrtm1Q8BXQ3 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Lrtm1Q8BXQ3 Gm37811-201ENSMUST00000192416 2601 ntBASIC15.24■□□□□ 0.03
Lrtm1Q8BXQ3 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Lrtm1Q8BXQ3 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Lrtm1Q8BXQ3 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Lrtm1Q8BXQ3 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Lrtm1Q8BXQ3 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Lrtm1Q8BXQ3 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Lrtm1Q8BXQ3 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Lrtm1Q8BXQ3 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Lrtm1Q8BXQ3 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Lrtm1Q8BXQ3 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Lrtm1Q8BXQ3 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Lrtm1Q8BXQ3 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC15.23■□□□□ 0.03
Lrtm1Q8BXQ3 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Lrtm1Q8BXQ3 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Lrtm1Q8BXQ3 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Lrtm1Q8BXQ3 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC15.23■□□□□ 0.03
Lrtm1Q8BXQ3 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Lrtm1Q8BXQ3 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC15.23■□□□□ 0.03
Lrtm1Q8BXQ3 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Lrtm1Q8BXQ3 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Lrtm1Q8BXQ3 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Lrtm1Q8BXQ3 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Lrtm1Q8BXQ3 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Lrtm1Q8BXQ3 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC15.23■□□□□ 0.03
Lrtm1Q8BXQ3 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Lrtm1Q8BXQ3 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Lrtm1Q8BXQ3 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Lrtm1Q8BXQ3 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Lrtm1Q8BXQ3 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Lrtm1Q8BXQ3 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Lrtm1Q8BXQ3 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Lrtm1Q8BXQ3 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Lrtm1Q8BXQ3 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Lrtm1Q8BXQ3 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Lrtm1Q8BXQ3 AC125311.2-201ENSMUST00000227477 1940 ntBASIC15.22■□□□□ 0.03
Lrtm1Q8BXQ3 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC15.22■□□□□ 0.03
Lrtm1Q8BXQ3 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Lrtm1Q8BXQ3 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC15.22■□□□□ 0.03
Lrtm1Q8BXQ3 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Lrtm1Q8BXQ3 Mir5122-201ENSMUST00000175004 89 ntBASIC15.22■□□□□ 0.03
Lrtm1Q8BXQ3 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC15.22■□□□□ 0.03
Lrtm1Q8BXQ3 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC15.22■□□□□ 0.03
Lrtm1Q8BXQ3 Gm4974-201ENSMUST00000209974 875 ntBASIC15.22■□□□□ 0.03
Lrtm1Q8BXQ3 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Lrtm1Q8BXQ3 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Lrtm1Q8BXQ3 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Lrtm1Q8BXQ3 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Lrtm1Q8BXQ3 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Lrtm1Q8BXQ3 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 39.6 ms