Protein–RNA interactions for Protein: Q8BUE1

Slc9a4, Sodium/hydrogen exchanger 4, mousemouse

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc9a4Q8BUE1 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Slc9a4Q8BUE1 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Slc9a4Q8BUE1 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Slc9a4Q8BUE1 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Slc9a4Q8BUE1 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
Slc9a4Q8BUE1 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Slc9a4Q8BUE1 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Slc9a4Q8BUE1 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC18.25■□□□□ 0.51
Slc9a4Q8BUE1 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Slc9a4Q8BUE1 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC18.25■□□□□ 0.51
Slc9a4Q8BUE1 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Slc9a4Q8BUE1 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
Slc9a4Q8BUE1 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC18.25■□□□□ 0.51
Slc9a4Q8BUE1 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Slc9a4Q8BUE1 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC18.25■□□□□ 0.51
Slc9a4Q8BUE1 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Slc9a4Q8BUE1 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Slc9a4Q8BUE1 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
Slc9a4Q8BUE1 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
Slc9a4Q8BUE1 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
Slc9a4Q8BUE1 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Slc9a4Q8BUE1 Gm43702-201ENSMUST00000198772 2546 ntBASIC18.25■□□□□ 0.51
Slc9a4Q8BUE1 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC18.25■□□□□ 0.51
Slc9a4Q8BUE1 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Slc9a4Q8BUE1 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Slc9a4Q8BUE1 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Slc9a4Q8BUE1 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Slc9a4Q8BUE1 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Slc9a4Q8BUE1 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Slc9a4Q8BUE1 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Slc9a4Q8BUE1 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Slc9a4Q8BUE1 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
Slc9a4Q8BUE1 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Slc9a4Q8BUE1 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
Slc9a4Q8BUE1 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
Slc9a4Q8BUE1 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Slc9a4Q8BUE1 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Slc9a4Q8BUE1 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
Slc9a4Q8BUE1 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Slc9a4Q8BUE1 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC18.24■□□□□ 0.51
Slc9a4Q8BUE1 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Slc9a4Q8BUE1 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Slc9a4Q8BUE1 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
Slc9a4Q8BUE1 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Slc9a4Q8BUE1 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Slc9a4Q8BUE1 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
Slc9a4Q8BUE1 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Slc9a4Q8BUE1 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Slc9a4Q8BUE1 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Slc9a4Q8BUE1 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC18.23■□□□□ 0.51
Slc9a4Q8BUE1 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Slc9a4Q8BUE1 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC18.23■□□□□ 0.51
Slc9a4Q8BUE1 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC18.23■□□□□ 0.51
Slc9a4Q8BUE1 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC18.23■□□□□ 0.51
Slc9a4Q8BUE1 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC18.23■□□□□ 0.51
Slc9a4Q8BUE1 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Slc9a4Q8BUE1 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Slc9a4Q8BUE1 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
Slc9a4Q8BUE1 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Slc9a4Q8BUE1 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Slc9a4Q8BUE1 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Slc9a4Q8BUE1 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC18.23■□□□□ 0.51
Slc9a4Q8BUE1 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Slc9a4Q8BUE1 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Slc9a4Q8BUE1 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC18.22■□□□□ 0.51
Slc9a4Q8BUE1 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Slc9a4Q8BUE1 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Slc9a4Q8BUE1 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC18.22■□□□□ 0.51
Slc9a4Q8BUE1 Timm23-208ENSMUST00000226683 750 ntBASIC18.22■□□□□ 0.51
Slc9a4Q8BUE1 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Slc9a4Q8BUE1 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Slc9a4Q8BUE1 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Slc9a4Q8BUE1 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
Slc9a4Q8BUE1 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC18.22■□□□□ 0.51
Slc9a4Q8BUE1 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Slc9a4Q8BUE1 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Slc9a4Q8BUE1 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Slc9a4Q8BUE1 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Slc9a4Q8BUE1 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Slc9a4Q8BUE1 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC18.21■□□□□ 0.51
Slc9a4Q8BUE1 Mir5122-201ENSMUST00000175004 89 ntBASIC18.21■□□□□ 0.51
Slc9a4Q8BUE1 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC18.21■□□□□ 0.51
Slc9a4Q8BUE1 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Slc9a4Q8BUE1 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Slc9a4Q8BUE1 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Slc9a4Q8BUE1 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Slc9a4Q8BUE1 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Slc9a4Q8BUE1 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Slc9a4Q8BUE1 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Slc9a4Q8BUE1 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Slc9a4Q8BUE1 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC18.21■□□□□ 0.5
Slc9a4Q8BUE1 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
Slc9a4Q8BUE1 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Slc9a4Q8BUE1 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
Slc9a4Q8BUE1 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Slc9a4Q8BUE1 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Slc9a4Q8BUE1 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Slc9a4Q8BUE1 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Slc9a4Q8BUE1 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
Slc9a4Q8BUE1 Gm12085-201ENSMUST00000119263 940 ntBASIC18.2■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 36.7 ms