Protein–RNA interactions for Protein: Q8BTW8

Cdk5rap1, CDK5 regulatory subunit-associated protein 1, mousemouse

Predictions only

Length 588 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk5rap1Q8BTW8 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cdk5rap1Q8BTW8 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
Cdk5rap1Q8BTW8 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cdk5rap1Q8BTW8 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC16.59■□□□□ 0.25
Cdk5rap1Q8BTW8 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
Cdk5rap1Q8BTW8 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Cdk5rap1Q8BTW8 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
Cdk5rap1Q8BTW8 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC16.58■□□□□ 0.24
Cdk5rap1Q8BTW8 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
Cdk5rap1Q8BTW8 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Cdk5rap1Q8BTW8 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Cdk5rap1Q8BTW8 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC16.58■□□□□ 0.24
Cdk5rap1Q8BTW8 Gm43353-201ENSMUST00000199224 1295 ntBASIC16.58■□□□□ 0.24
Cdk5rap1Q8BTW8 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC16.58■□□□□ 0.24
Cdk5rap1Q8BTW8 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Cdk5rap1Q8BTW8 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Cdk5rap1Q8BTW8 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Cdk5rap1Q8BTW8 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Cdk5rap1Q8BTW8 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Cdk5rap1Q8BTW8 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Cdk5rap1Q8BTW8 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Cdk5rap1Q8BTW8 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cdk5rap1Q8BTW8 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Cdk5rap1Q8BTW8 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cdk5rap1Q8BTW8 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Cdk5rap1Q8BTW8 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
Cdk5rap1Q8BTW8 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Cdk5rap1Q8BTW8 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC16.57■□□□□ 0.24
Cdk5rap1Q8BTW8 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC16.57■□□□□ 0.24
Cdk5rap1Q8BTW8 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
Cdk5rap1Q8BTW8 Gm18959-201ENSMUST00000208954 655 ntBASIC16.57■□□□□ 0.24
Cdk5rap1Q8BTW8 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC16.57■□□□□ 0.24
Cdk5rap1Q8BTW8 Dmtn-210ENSMUST00000228824 2377 ntBASIC16.57■□□□□ 0.24
Cdk5rap1Q8BTW8 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC16.57■□□□□ 0.24
Cdk5rap1Q8BTW8 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cdk5rap1Q8BTW8 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cdk5rap1Q8BTW8 Gm45141-201ENSMUST00000206502 1888 ntBASIC16.56■□□□□ 0.24
Cdk5rap1Q8BTW8 Idnk-204ENSMUST00000226010 1898 ntBASIC16.56■□□□□ 0.24
Cdk5rap1Q8BTW8 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Cdk5rap1Q8BTW8 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Cdk5rap1Q8BTW8 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Cdk5rap1Q8BTW8 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Cdk5rap1Q8BTW8 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Cdk5rap1Q8BTW8 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Cdk5rap1Q8BTW8 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Cdk5rap1Q8BTW8 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Cdk5rap1Q8BTW8 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC16.56■□□□□ 0.24
Cdk5rap1Q8BTW8 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Cdk5rap1Q8BTW8 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Cdk5rap1Q8BTW8 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC16.56■□□□□ 0.24
Cdk5rap1Q8BTW8 Gm7638-201ENSMUST00000121348 967 ntBASIC16.56■□□□□ 0.24
Cdk5rap1Q8BTW8 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC16.56■□□□□ 0.24
Cdk5rap1Q8BTW8 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Cdk5rap1Q8BTW8 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Cdk5rap1Q8BTW8 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Cdk5rap1Q8BTW8 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC16.56■□□□□ 0.24
Cdk5rap1Q8BTW8 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
Cdk5rap1Q8BTW8 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Cdk5rap1Q8BTW8 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC16.56■□□□□ 0.24
Cdk5rap1Q8BTW8 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Cdk5rap1Q8BTW8 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Cdk5rap1Q8BTW8 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Cdk5rap1Q8BTW8 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Cdk5rap1Q8BTW8 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Cdk5rap1Q8BTW8 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Cdk5rap1Q8BTW8 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Cdk5rap1Q8BTW8 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC16.55■□□□□ 0.24
Cdk5rap1Q8BTW8 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Cdk5rap1Q8BTW8 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Cdk5rap1Q8BTW8 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Cdk5rap1Q8BTW8 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC16.55■□□□□ 0.24
Cdk5rap1Q8BTW8 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Cdk5rap1Q8BTW8 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Cdk5rap1Q8BTW8 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Cdk5rap1Q8BTW8 Gm2274-201ENSMUST00000184539 609 ntBASIC16.55■□□□□ 0.24
Cdk5rap1Q8BTW8 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Cdk5rap1Q8BTW8 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Cdk5rap1Q8BTW8 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC16.55■□□□□ 0.24
Cdk5rap1Q8BTW8 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Cdk5rap1Q8BTW8 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Cdk5rap1Q8BTW8 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Cdk5rap1Q8BTW8 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Cdk5rap1Q8BTW8 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC16.54■□□□□ 0.24
Cdk5rap1Q8BTW8 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Cdk5rap1Q8BTW8 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Cdk5rap1Q8BTW8 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Cdk5rap1Q8BTW8 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Cdk5rap1Q8BTW8 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Cdk5rap1Q8BTW8 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Cdk5rap1Q8BTW8 Gm42900-201ENSMUST00000197184 2167 ntBASIC16.54■□□□□ 0.24
Cdk5rap1Q8BTW8 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Cdk5rap1Q8BTW8 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Cdk5rap1Q8BTW8 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Cdk5rap1Q8BTW8 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Cdk5rap1Q8BTW8 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Cdk5rap1Q8BTW8 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Cdk5rap1Q8BTW8 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Cdk5rap1Q8BTW8 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC16.54■□□□□ 0.24
Cdk5rap1Q8BTW8 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC16.54■□□□□ 0.24
Cdk5rap1Q8BTW8 Gm37025-201ENSMUST00000195159 829 ntBASIC16.54■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 36.3 ms