Protein–RNA interactions for Protein: Q8BL00

Cdhr3, Cadherin-related family member 3, mousemouse

Predictions only

Length 831 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdhr3Q8BL00 Gm2399-201ENSMUST00000104944 225 ntBASIC15.29■□□□□ 0.04
Cdhr3Q8BL00 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Cdhr3Q8BL00 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Cdhr3Q8BL00 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cdhr3Q8BL00 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC15.29■□□□□ 0.04
Cdhr3Q8BL00 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cdhr3Q8BL00 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cdhr3Q8BL00 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Cdhr3Q8BL00 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cdhr3Q8BL00 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cdhr3Q8BL00 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cdhr3Q8BL00 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cdhr3Q8BL00 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC15.28■□□□□ 0.04
Cdhr3Q8BL00 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Cdhr3Q8BL00 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cdhr3Q8BL00 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Cdhr3Q8BL00 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cdhr3Q8BL00 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
Cdhr3Q8BL00 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC15.28■□□□□ 0.04
Cdhr3Q8BL00 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC15.28■□□□□ 0.04
Cdhr3Q8BL00 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cdhr3Q8BL00 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cdhr3Q8BL00 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cdhr3Q8BL00 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cdhr3Q8BL00 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cdhr3Q8BL00 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Cdhr3Q8BL00 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Cdhr3Q8BL00 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
Cdhr3Q8BL00 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Cdhr3Q8BL00 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
Cdhr3Q8BL00 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Cdhr3Q8BL00 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Cdhr3Q8BL00 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Cdhr3Q8BL00 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Cdhr3Q8BL00 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Cdhr3Q8BL00 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Cdhr3Q8BL00 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Cdhr3Q8BL00 Gm37820-201ENSMUST00000194021 2147 ntBASIC15.27■□□□□ 0.04
Cdhr3Q8BL00 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC15.27■□□□□ 0.04
Cdhr3Q8BL00 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Cdhr3Q8BL00 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Cdhr3Q8BL00 Zfp783-201ENSMUST00000095946 670 ntBASIC15.27■□□□□ 0.04
Cdhr3Q8BL00 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Cdhr3Q8BL00 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Cdhr3Q8BL00 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Cdhr3Q8BL00 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Cdhr3Q8BL00 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Cdhr3Q8BL00 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cdhr3Q8BL00 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cdhr3Q8BL00 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cdhr3Q8BL00 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cdhr3Q8BL00 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cdhr3Q8BL00 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cdhr3Q8BL00 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cdhr3Q8BL00 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cdhr3Q8BL00 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cdhr3Q8BL00 Gm6211-202ENSMUST00000167849 925 ntBASIC15.26■□□□□ 0.03
Cdhr3Q8BL00 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cdhr3Q8BL00 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cdhr3Q8BL00 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cdhr3Q8BL00 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cdhr3Q8BL00 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cdhr3Q8BL00 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Cdhr3Q8BL00 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cdhr3Q8BL00 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cdhr3Q8BL00 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Cdhr3Q8BL00 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC15.25■□□□□ 0.03
Cdhr3Q8BL00 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cdhr3Q8BL00 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC15.25■□□□□ 0.03
Cdhr3Q8BL00 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Cdhr3Q8BL00 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cdhr3Q8BL00 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cdhr3Q8BL00 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Cdhr3Q8BL00 Gm7290-201ENSMUST00000104990 617 ntBASIC15.25■□□□□ 0.03
Cdhr3Q8BL00 Gm12918-201ENSMUST00000120234 636 ntBASIC15.25■□□□□ 0.03
Cdhr3Q8BL00 Gm15710-201ENSMUST00000121821 636 ntBASIC15.25■□□□□ 0.03
Cdhr3Q8BL00 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Cdhr3Q8BL00 Gm5075-201ENSMUST00000196916 622 ntBASIC15.25■□□□□ 0.03
Cdhr3Q8BL00 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC15.25■□□□□ 0.03
Cdhr3Q8BL00 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC15.25■□□□□ 0.03
Cdhr3Q8BL00 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Cdhr3Q8BL00 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
Cdhr3Q8BL00 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Cdhr3Q8BL00 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cdhr3Q8BL00 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cdhr3Q8BL00 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cdhr3Q8BL00 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC15.25■□□□□ 0.03
Cdhr3Q8BL00 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cdhr3Q8BL00 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC15.25■□□□□ 0.03
Cdhr3Q8BL00 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC15.24■□□□□ 0.03
Cdhr3Q8BL00 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cdhr3Q8BL00 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC15.24■□□□□ 0.03
Cdhr3Q8BL00 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cdhr3Q8BL00 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cdhr3Q8BL00 Gm10418-201ENSMUST00000100943 576 ntBASIC15.24■□□□□ 0.03
Cdhr3Q8BL00 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC15.24■□□□□ 0.03
Cdhr3Q8BL00 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC15.24■□□□□ 0.03
Cdhr3Q8BL00 Gm42555-201ENSMUST00000199304 1039 ntBASIC15.24■□□□□ 0.03
Cdhr3Q8BL00 Gm44549-201ENSMUST00000208351 577 ntBASIC15.24■□□□□ 0.03
Cdhr3Q8BL00 Wnt10b-205ENSMUST00000226846 1204 ntBASIC15.24■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 61.5 ms