Protein–RNA interactions for Protein: Q8BKX6

Smg1, Serine/threonine-protein kinase SMG1, mousemouse

Known RBP Predictions only

Length 3,658 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smg1Q8BKX6 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Smg1Q8BKX6 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Smg1Q8BKX6 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC14.82□□□□□ -0.04
Smg1Q8BKX6 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Smg1Q8BKX6 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
Smg1Q8BKX6 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Smg1Q8BKX6 Gm27702-201ENSMUST00000184512 56 ntBASIC14.82□□□□□ -0.04
Smg1Q8BKX6 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Smg1Q8BKX6 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC14.82□□□□□ -0.04
Smg1Q8BKX6 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Smg1Q8BKX6 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC14.81□□□□□ -0.04
Smg1Q8BKX6 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC14.81□□□□□ -0.04
Smg1Q8BKX6 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC14.81□□□□□ -0.04
Smg1Q8BKX6 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Smg1Q8BKX6 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC14.81□□□□□ -0.04
Smg1Q8BKX6 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC14.81□□□□□ -0.04
Smg1Q8BKX6 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Smg1Q8BKX6 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Smg1Q8BKX6 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
Smg1Q8BKX6 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Smg1Q8BKX6 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Smg1Q8BKX6 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC14.81□□□□□ -0.04
Smg1Q8BKX6 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Smg1Q8BKX6 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC14.81□□□□□ -0.04
Smg1Q8BKX6 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC14.81□□□□□ -0.04
Smg1Q8BKX6 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Smg1Q8BKX6 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Smg1Q8BKX6 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Smg1Q8BKX6 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Smg1Q8BKX6 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Smg1Q8BKX6 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Smg1Q8BKX6 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Smg1Q8BKX6 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Smg1Q8BKX6 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Smg1Q8BKX6 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Smg1Q8BKX6 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Smg1Q8BKX6 Gm37805-201ENSMUST00000192612 1094 ntBASIC14.8□□□□□ -0.04
Smg1Q8BKX6 CT943659.1-201ENSMUST00000215459 326 ntBASIC14.8□□□□□ -0.04
Smg1Q8BKX6 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Smg1Q8BKX6 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Smg1Q8BKX6 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC14.79□□□□□ -0.04
Smg1Q8BKX6 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Smg1Q8BKX6 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Smg1Q8BKX6 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Smg1Q8BKX6 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Smg1Q8BKX6 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
Smg1Q8BKX6 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Smg1Q8BKX6 Ighv6-1-201ENSMUST00000193612 343 ntBASIC14.79□□□□□ -0.04
Smg1Q8BKX6 Gm5186-201ENSMUST00000218781 920 ntBASIC14.79□□□□□ -0.04
Smg1Q8BKX6 Gm35558-201ENSMUST00000222675 2219 ntBASIC14.79□□□□□ -0.04
Smg1Q8BKX6 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Smg1Q8BKX6 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Smg1Q8BKX6 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Smg1Q8BKX6 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Smg1Q8BKX6 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Smg1Q8BKX6 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Smg1Q8BKX6 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Smg1Q8BKX6 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Smg1Q8BKX6 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Smg1Q8BKX6 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC14.78□□□□□ -0.04
Smg1Q8BKX6 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Smg1Q8BKX6 Gm14057-201ENSMUST00000120631 482 ntBASIC14.78□□□□□ -0.04
Smg1Q8BKX6 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Smg1Q8BKX6 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC14.78□□□□□ -0.04
Smg1Q8BKX6 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Smg1Q8BKX6 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Smg1Q8BKX6 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Smg1Q8BKX6 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Smg1Q8BKX6 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC14.78□□□□□ -0.04
Smg1Q8BKX6 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC14.78□□□□□ -0.04
Smg1Q8BKX6 AC108858.1-201ENSMUST00000228461 1498 ntBASIC14.78□□□□□ -0.04
Smg1Q8BKX6 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Smg1Q8BKX6 Gm38308-201ENSMUST00000194934 1809 ntBASIC14.77□□□□□ -0.04
Smg1Q8BKX6 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC14.77□□□□□ -0.04
Smg1Q8BKX6 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Smg1Q8BKX6 AC161829.1-201ENSMUST00000220298 281 ntBASIC14.77□□□□□ -0.04
Smg1Q8BKX6 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Smg1Q8BKX6 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
Smg1Q8BKX6 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC14.77□□□□□ -0.04
Smg1Q8BKX6 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Smg1Q8BKX6 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Smg1Q8BKX6 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Smg1Q8BKX6 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC14.77□□□□□ -0.05
Smg1Q8BKX6 Gm2756-201ENSMUST00000195851 400 ntBASIC14.77□□□□□ -0.05
Smg1Q8BKX6 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Smg1Q8BKX6 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Smg1Q8BKX6 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Smg1Q8BKX6 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Smg1Q8BKX6 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Smg1Q8BKX6 AC121961.1-201ENSMUST00000218594 1779 ntBASIC14.77□□□□□ -0.05
Smg1Q8BKX6 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Smg1Q8BKX6 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC14.77□□□□□ -0.05
Smg1Q8BKX6 Gm42670-201ENSMUST00000201816 1292 ntBASIC14.77□□□□□ -0.05
Smg1Q8BKX6 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC14.77□□□□□ -0.05
Smg1Q8BKX6 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
Smg1Q8BKX6 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Smg1Q8BKX6 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Smg1Q8BKX6 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Smg1Q8BKX6 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Smg1Q8BKX6 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 23.2 ms