Protein–RNA interactions for Protein: Q8BJF9

Chmp2b, Charged multivesicular body protein 2b, mousemouse

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2bQ8BJF9 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
Chmp2bQ8BJF9 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC17.89■□□□□ 0.45
Chmp2bQ8BJF9 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Chmp2bQ8BJF9 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Chmp2bQ8BJF9 Gm42555-201ENSMUST00000199304 1039 ntBASIC17.89■□□□□ 0.45
Chmp2bQ8BJF9 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Chmp2bQ8BJF9 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Chmp2bQ8BJF9 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Chmp2bQ8BJF9 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC17.89■□□□□ 0.45
Chmp2bQ8BJF9 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Chmp2bQ8BJF9 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Chmp2bQ8BJF9 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Chmp2bQ8BJF9 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC17.88■□□□□ 0.45
Chmp2bQ8BJF9 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Chmp2bQ8BJF9 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
Chmp2bQ8BJF9 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Chmp2bQ8BJF9 Gm2399-201ENSMUST00000104944 225 ntBASIC17.88■□□□□ 0.45
Chmp2bQ8BJF9 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC17.88■□□□□ 0.45
Chmp2bQ8BJF9 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Chmp2bQ8BJF9 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Chmp2bQ8BJF9 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC17.88■□□□□ 0.45
Chmp2bQ8BJF9 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Chmp2bQ8BJF9 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Chmp2bQ8BJF9 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Chmp2bQ8BJF9 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Chmp2bQ8BJF9 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Chmp2bQ8BJF9 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Chmp2bQ8BJF9 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC17.87■□□□□ 0.45
Chmp2bQ8BJF9 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Chmp2bQ8BJF9 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Chmp2bQ8BJF9 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Chmp2bQ8BJF9 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
Chmp2bQ8BJF9 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Chmp2bQ8BJF9 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Chmp2bQ8BJF9 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Chmp2bQ8BJF9 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Chmp2bQ8BJF9 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
Chmp2bQ8BJF9 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Chmp2bQ8BJF9 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
Chmp2bQ8BJF9 Gm38285-201ENSMUST00000192928 922 ntBASIC17.87■□□□□ 0.45
Chmp2bQ8BJF9 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC17.87■□□□□ 0.45
Chmp2bQ8BJF9 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
Chmp2bQ8BJF9 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Chmp2bQ8BJF9 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Chmp2bQ8BJF9 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Chmp2bQ8BJF9 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Chmp2bQ8BJF9 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Chmp2bQ8BJF9 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Chmp2bQ8BJF9 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Chmp2bQ8BJF9 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Chmp2bQ8BJF9 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Chmp2bQ8BJF9 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Chmp2bQ8BJF9 Gm10849-201ENSMUST00000100397 618 ntBASIC17.86■□□□□ 0.45
Chmp2bQ8BJF9 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC17.86■□□□□ 0.45
Chmp2bQ8BJF9 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Chmp2bQ8BJF9 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
Chmp2bQ8BJF9 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
Chmp2bQ8BJF9 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
Chmp2bQ8BJF9 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Chmp2bQ8BJF9 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Chmp2bQ8BJF9 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Chmp2bQ8BJF9 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Chmp2bQ8BJF9 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Chmp2bQ8BJF9 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Chmp2bQ8BJF9 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Chmp2bQ8BJF9 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Chmp2bQ8BJF9 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC17.85■□□□□ 0.45
Chmp2bQ8BJF9 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Chmp2bQ8BJF9 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC17.85■□□□□ 0.45
Chmp2bQ8BJF9 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Chmp2bQ8BJF9 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Chmp2bQ8BJF9 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Chmp2bQ8BJF9 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC17.85■□□□□ 0.45
Chmp2bQ8BJF9 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Chmp2bQ8BJF9 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Chmp2bQ8BJF9 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
Chmp2bQ8BJF9 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Chmp2bQ8BJF9 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Chmp2bQ8BJF9 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Chmp2bQ8BJF9 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Chmp2bQ8BJF9 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Chmp2bQ8BJF9 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Chmp2bQ8BJF9 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
Chmp2bQ8BJF9 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Chmp2bQ8BJF9 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Chmp2bQ8BJF9 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Chmp2bQ8BJF9 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Chmp2bQ8BJF9 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Chmp2bQ8BJF9 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
Chmp2bQ8BJF9 Gm7290-201ENSMUST00000104990 617 ntBASIC17.84■□□□□ 0.45
Chmp2bQ8BJF9 Gm12918-201ENSMUST00000120234 636 ntBASIC17.84■□□□□ 0.45
Chmp2bQ8BJF9 Gm15710-201ENSMUST00000121821 636 ntBASIC17.84■□□□□ 0.45
Chmp2bQ8BJF9 Gm5075-201ENSMUST00000196916 622 ntBASIC17.84■□□□□ 0.45
Chmp2bQ8BJF9 Gm42569-201ENSMUST00000200539 472 ntBASIC17.84■□□□□ 0.45
Chmp2bQ8BJF9 Gm29791-202ENSMUST00000207888 369 ntBASIC17.84■□□□□ 0.45
Chmp2bQ8BJF9 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Chmp2bQ8BJF9 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
Chmp2bQ8BJF9 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Chmp2bQ8BJF9 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC17.84■□□□□ 0.45
Chmp2bQ8BJF9 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC17.84■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 25.3 ms