Protein–RNA interactions for Protein: Q8BI21

Rnf38, E3 ubiquitin-protein ligase RNF38, mousemouse

Predictions only

Length 518 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf38Q8BI21 AC108858.1-201ENSMUST00000228461 1498 ntBASIC16.86■□□□□ 0.29
Rnf38Q8BI21 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Rnf38Q8BI21 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Rnf38Q8BI21 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Rnf38Q8BI21 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC16.85■□□□□ 0.29
Rnf38Q8BI21 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
Rnf38Q8BI21 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Rnf38Q8BI21 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
Rnf38Q8BI21 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC16.85■□□□□ 0.29
Rnf38Q8BI21 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Rnf38Q8BI21 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Rnf38Q8BI21 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Rnf38Q8BI21 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Rnf38Q8BI21 Gm12933-201ENSMUST00000120203 872 ntBASIC16.85■□□□□ 0.29
Rnf38Q8BI21 Gm6211-202ENSMUST00000167849 925 ntBASIC16.85■□□□□ 0.29
Rnf38Q8BI21 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
Rnf38Q8BI21 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC16.85■□□□□ 0.29
Rnf38Q8BI21 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Rnf38Q8BI21 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
Rnf38Q8BI21 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Rnf38Q8BI21 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
Rnf38Q8BI21 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Rnf38Q8BI21 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
Rnf38Q8BI21 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Rnf38Q8BI21 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Rnf38Q8BI21 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Rnf38Q8BI21 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Rnf38Q8BI21 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Rnf38Q8BI21 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Rnf38Q8BI21 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Rnf38Q8BI21 Gm2399-201ENSMUST00000104944 225 ntBASIC16.84■□□□□ 0.29
Rnf38Q8BI21 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC16.84■□□□□ 0.29
Rnf38Q8BI21 Gm13148-201ENSMUST00000118892 745 ntBASIC16.84■□□□□ 0.29
Rnf38Q8BI21 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC16.84■□□□□ 0.29
Rnf38Q8BI21 Mir8112-201ENSMUST00000184382 131 ntBASIC16.84■□□□□ 0.29
Rnf38Q8BI21 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Rnf38Q8BI21 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Rnf38Q8BI21 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Rnf38Q8BI21 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Rnf38Q8BI21 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Rnf38Q8BI21 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Rnf38Q8BI21 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Rnf38Q8BI21 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Rnf38Q8BI21 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Rnf38Q8BI21 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Rnf38Q8BI21 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Rnf38Q8BI21 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Rnf38Q8BI21 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Rnf38Q8BI21 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC16.84■□□□□ 0.29
Rnf38Q8BI21 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Rnf38Q8BI21 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Rnf38Q8BI21 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Rnf38Q8BI21 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Rnf38Q8BI21 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.29
Rnf38Q8BI21 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Rnf38Q8BI21 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
Rnf38Q8BI21 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Rnf38Q8BI21 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
Rnf38Q8BI21 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC16.83■□□□□ 0.28
Rnf38Q8BI21 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Rnf38Q8BI21 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Rnf38Q8BI21 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Rnf38Q8BI21 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Rnf38Q8BI21 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Rnf38Q8BI21 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Rnf38Q8BI21 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Rnf38Q8BI21 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Rnf38Q8BI21 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rnf38Q8BI21 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rnf38Q8BI21 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Rnf38Q8BI21 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rnf38Q8BI21 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rnf38Q8BI21 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Rnf38Q8BI21 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rnf38Q8BI21 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Rnf38Q8BI21 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC16.82■□□□□ 0.28
Rnf38Q8BI21 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC16.82■□□□□ 0.28
Rnf38Q8BI21 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Rnf38Q8BI21 Mir5133-201ENSMUST00000174955 77 ntBASIC16.82■□□□□ 0.28
Rnf38Q8BI21 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC16.82■□□□□ 0.28
Rnf38Q8BI21 Gm29791-202ENSMUST00000207888 369 ntBASIC16.82■□□□□ 0.28
Rnf38Q8BI21 Gm44549-201ENSMUST00000208351 577 ntBASIC16.82■□□□□ 0.28
Rnf38Q8BI21 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC16.82■□□□□ 0.28
Rnf38Q8BI21 Wnt10b-205ENSMUST00000226846 1204 ntBASIC16.82■□□□□ 0.28
Rnf38Q8BI21 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rnf38Q8BI21 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC16.82■□□□□ 0.28
Rnf38Q8BI21 Gm45412-201ENSMUST00000210217 2275 ntBASIC16.82■□□□□ 0.28
Rnf38Q8BI21 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rnf38Q8BI21 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rnf38Q8BI21 Gm16499-203ENSMUST00000204633 2177 ntBASIC16.82■□□□□ 0.28
Rnf38Q8BI21 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rnf38Q8BI21 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rnf38Q8BI21 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rnf38Q8BI21 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC16.82■□□□□ 0.28
Rnf38Q8BI21 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Rnf38Q8BI21 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rnf38Q8BI21 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rnf38Q8BI21 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Rnf38Q8BI21 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rnf38Q8BI21 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 35.2 ms