Protein–RNA interactions for Protein: Q8BGX0

Trim23, E3 ubiquitin-protein ligase TRIM23, mousemouse

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim23Q8BGX0 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC16.86■□□□□ 0.29
Trim23Q8BGX0 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Trim23Q8BGX0 Otx2os1-204ENSMUST00000227221 751 ntBASIC16.86■□□□□ 0.29
Trim23Q8BGX0 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trim23Q8BGX0 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trim23Q8BGX0 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Trim23Q8BGX0 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Trim23Q8BGX0 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trim23Q8BGX0 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trim23Q8BGX0 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trim23Q8BGX0 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trim23Q8BGX0 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trim23Q8BGX0 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Trim23Q8BGX0 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trim23Q8BGX0 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trim23Q8BGX0 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC16.85■□□□□ 0.29
Trim23Q8BGX0 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Trim23Q8BGX0 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC16.85■□□□□ 0.29
Trim23Q8BGX0 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC16.85■□□□□ 0.29
Trim23Q8BGX0 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Trim23Q8BGX0 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trim23Q8BGX0 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trim23Q8BGX0 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC16.85■□□□□ 0.29
Trim23Q8BGX0 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trim23Q8BGX0 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trim23Q8BGX0 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
Trim23Q8BGX0 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
Trim23Q8BGX0 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
Trim23Q8BGX0 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Trim23Q8BGX0 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trim23Q8BGX0 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trim23Q8BGX0 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC16.84■□□□□ 0.29
Trim23Q8BGX0 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trim23Q8BGX0 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Trim23Q8BGX0 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trim23Q8BGX0 Gm12085-201ENSMUST00000119263 940 ntBASIC16.84■□□□□ 0.29
Trim23Q8BGX0 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC16.84■□□□□ 0.29
Trim23Q8BGX0 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC16.84■□□□□ 0.29
Trim23Q8BGX0 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trim23Q8BGX0 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
Trim23Q8BGX0 Gm5417-201ENSMUST00000079706 384 ntBASIC16.84■□□□□ 0.29
Trim23Q8BGX0 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
Trim23Q8BGX0 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trim23Q8BGX0 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC16.84■□□□□ 0.29
Trim23Q8BGX0 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trim23Q8BGX0 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Trim23Q8BGX0 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trim23Q8BGX0 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trim23Q8BGX0 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trim23Q8BGX0 Gm37811-201ENSMUST00000192416 2601 ntBASIC16.83■□□□□ 0.29
Trim23Q8BGX0 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Trim23Q8BGX0 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trim23Q8BGX0 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Trim23Q8BGX0 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trim23Q8BGX0 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
Trim23Q8BGX0 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trim23Q8BGX0 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC16.83■□□□□ 0.28
Trim23Q8BGX0 AC135963.1-201ENSMUST00000211640 717 ntBASIC16.83■□□□□ 0.28
Trim23Q8BGX0 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trim23Q8BGX0 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trim23Q8BGX0 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trim23Q8BGX0 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trim23Q8BGX0 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Trim23Q8BGX0 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trim23Q8BGX0 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Trim23Q8BGX0 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trim23Q8BGX0 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trim23Q8BGX0 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC16.82■□□□□ 0.28
Trim23Q8BGX0 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trim23Q8BGX0 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Trim23Q8BGX0 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trim23Q8BGX0 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC16.82■□□□□ 0.28
Trim23Q8BGX0 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Trim23Q8BGX0 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC16.82■□□□□ 0.28
Trim23Q8BGX0 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Trim23Q8BGX0 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Trim23Q8BGX0 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trim23Q8BGX0 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trim23Q8BGX0 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC16.82■□□□□ 0.28
Trim23Q8BGX0 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC16.82■□□□□ 0.28
Trim23Q8BGX0 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trim23Q8BGX0 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trim23Q8BGX0 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC16.81■□□□□ 0.28
Trim23Q8BGX0 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trim23Q8BGX0 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Trim23Q8BGX0 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trim23Q8BGX0 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC16.81■□□□□ 0.28
Trim23Q8BGX0 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC16.81■□□□□ 0.28
Trim23Q8BGX0 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Trim23Q8BGX0 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trim23Q8BGX0 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trim23Q8BGX0 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trim23Q8BGX0 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC16.81■□□□□ 0.28
Trim23Q8BGX0 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC16.81■□□□□ 0.28
Trim23Q8BGX0 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trim23Q8BGX0 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Trim23Q8BGX0 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trim23Q8BGX0 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
Trim23Q8BGX0 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trim23Q8BGX0 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC16.81■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 19.4 ms