Protein–RNA interactions for Protein: Q8BGJ9

U2af1l4, Splicing factor U2AF 26 kDa subunit, mousemouse

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2af1l4Q8BGJ9 Gm13559-201ENSMUST00000120476 863 ntBASIC20.59■□□□□ 0.89
U2af1l4Q8BGJ9 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
U2af1l4Q8BGJ9 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
U2af1l4Q8BGJ9 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC20.59■□□□□ 0.89
U2af1l4Q8BGJ9 Arhgef4-208ENSMUST00000211073 171 ntBASIC20.59■□□□□ 0.89
U2af1l4Q8BGJ9 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
U2af1l4Q8BGJ9 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
U2af1l4Q8BGJ9 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
U2af1l4Q8BGJ9 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
U2af1l4Q8BGJ9 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
U2af1l4Q8BGJ9 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC20.59■□□□□ 0.89
U2af1l4Q8BGJ9 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
U2af1l4Q8BGJ9 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
U2af1l4Q8BGJ9 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC20.59■□□□□ 0.89
U2af1l4Q8BGJ9 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
U2af1l4Q8BGJ9 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
U2af1l4Q8BGJ9 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC20.58■□□□□ 0.89
U2af1l4Q8BGJ9 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
U2af1l4Q8BGJ9 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
U2af1l4Q8BGJ9 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
U2af1l4Q8BGJ9 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
U2af1l4Q8BGJ9 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
U2af1l4Q8BGJ9 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
U2af1l4Q8BGJ9 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
U2af1l4Q8BGJ9 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
U2af1l4Q8BGJ9 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
U2af1l4Q8BGJ9 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
U2af1l4Q8BGJ9 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
U2af1l4Q8BGJ9 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC20.58■□□□□ 0.88
U2af1l4Q8BGJ9 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
U2af1l4Q8BGJ9 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.88
U2af1l4Q8BGJ9 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
U2af1l4Q8BGJ9 Gm37194-201ENSMUST00000193092 3031 ntBASIC20.58■□□□□ 0.88
U2af1l4Q8BGJ9 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
U2af1l4Q8BGJ9 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
U2af1l4Q8BGJ9 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
U2af1l4Q8BGJ9 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC20.58■□□□□ 0.88
U2af1l4Q8BGJ9 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
U2af1l4Q8BGJ9 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
U2af1l4Q8BGJ9 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
U2af1l4Q8BGJ9 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
U2af1l4Q8BGJ9 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC20.57■□□□□ 0.88
U2af1l4Q8BGJ9 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
U2af1l4Q8BGJ9 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
U2af1l4Q8BGJ9 Gm10517-202ENSMUST00000192970 758 ntBASIC20.57■□□□□ 0.88
U2af1l4Q8BGJ9 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
U2af1l4Q8BGJ9 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC20.57■□□□□ 0.88
U2af1l4Q8BGJ9 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
U2af1l4Q8BGJ9 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
U2af1l4Q8BGJ9 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
U2af1l4Q8BGJ9 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
U2af1l4Q8BGJ9 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
U2af1l4Q8BGJ9 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
U2af1l4Q8BGJ9 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
U2af1l4Q8BGJ9 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
U2af1l4Q8BGJ9 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC20.56■□□□□ 0.88
U2af1l4Q8BGJ9 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
U2af1l4Q8BGJ9 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
U2af1l4Q8BGJ9 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC20.56■□□□□ 0.88
U2af1l4Q8BGJ9 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
U2af1l4Q8BGJ9 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
U2af1l4Q8BGJ9 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
U2af1l4Q8BGJ9 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
U2af1l4Q8BGJ9 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
U2af1l4Q8BGJ9 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
U2af1l4Q8BGJ9 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
U2af1l4Q8BGJ9 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
U2af1l4Q8BGJ9 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
U2af1l4Q8BGJ9 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
U2af1l4Q8BGJ9 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
U2af1l4Q8BGJ9 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
U2af1l4Q8BGJ9 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC20.55■□□□□ 0.88
U2af1l4Q8BGJ9 Gm11539-201ENSMUST00000119837 557 ntBASIC20.55■□□□□ 0.88
U2af1l4Q8BGJ9 Gm13436-201ENSMUST00000120418 567 ntBASIC20.55■□□□□ 0.88
U2af1l4Q8BGJ9 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
U2af1l4Q8BGJ9 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC20.55■□□□□ 0.88
U2af1l4Q8BGJ9 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
U2af1l4Q8BGJ9 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
U2af1l4Q8BGJ9 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
U2af1l4Q8BGJ9 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
U2af1l4Q8BGJ9 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
U2af1l4Q8BGJ9 AC108858.1-201ENSMUST00000228461 1498 ntBASIC20.55■□□□□ 0.88
U2af1l4Q8BGJ9 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
U2af1l4Q8BGJ9 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
U2af1l4Q8BGJ9 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
U2af1l4Q8BGJ9 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
U2af1l4Q8BGJ9 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
U2af1l4Q8BGJ9 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC20.54■□□□□ 0.88
U2af1l4Q8BGJ9 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
U2af1l4Q8BGJ9 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC20.54■□□□□ 0.88
U2af1l4Q8BGJ9 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
U2af1l4Q8BGJ9 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
U2af1l4Q8BGJ9 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
U2af1l4Q8BGJ9 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
U2af1l4Q8BGJ9 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC20.54■□□□□ 0.88
U2af1l4Q8BGJ9 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC20.54■□□□□ 0.88
U2af1l4Q8BGJ9 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
U2af1l4Q8BGJ9 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
U2af1l4Q8BGJ9 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
U2af1l4Q8BGJ9 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms